Protein
MIA_00497_1
Length
495 amino acids
Browser: contig01:1433356-1434844+
Protein function
| EGGNOG: | 0PI3C | TFB2 | TFIIH and nucleotide excision repair factor 3 complexes |
|---|---|---|---|
| SGD closest match: | S000006043 | TFB2 | RNA polymerase II transcription factor B subunit 2 |
| CGD closest match: | CAL0000192947 | CAALFM_CR05560WA | RNA polymerase II transcription factor B subunit 2 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00146_1 | 75.510% | 490 | 0.0 | MCA_00146_1 |
| A0A0J9XC01_GEOCN | 70.082% | 488 | 0.0 | RNA polymerase II transcription factor B subunit 2 OS=Geotrichum candidum GN=BN980_GECA09s03519g PE=3 SV=1 |
| UniRef50_A0A0J9XC01 | 70.082% | 488 | 0.0 | RNA polymerase II transcription factor B subunit 2 n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XC01_GEOCN |
| A0A060T4X9_BLAAD | 58.896% | 489 | 0.0 | RNA polymerase II transcription factor B subunit 2 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B06644g PE=3 SV=1 |
| A0A167DBC4_9ASCO | 56.746% | 504 | 0.0 | RNA polymerase II transcription factor B subunit 2 OS=Sugiyamaella lignohabitans GN=TFB2 PE=3 SV=1 |
| TFB2_YARLI | 56.998% | 493 | 0.0 | RNA polymerase II transcription factor B subunit 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TFB2 PE=3 SV=1 |
| A0A1E4TIX0_9ASCO | 51.139% | 483 | 4.67e-172 | RNA polymerase II transcription factor B subunit 2 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20913 PE=3 SV=1 |
| Q59M53_CANAL | 46.654% | 523 | 5.58e-161 | RNA polymerase II transcription factor B subunit 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR05560WA PE=3 SV=1 |
| TFB2_YEAST | 46.575% | 511 | 1.79e-146 | RNA polymerase II transcription factor B subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFB2 PE=1 SV=1 |
| A0A1E3PCN8_9ASCO | 56.122% | 392 | 1.63e-134 | RNA polymerase II transcription factor B subunit 2 (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84617 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2604
Protein family membership
- Transcription factor TFIIH subunit p52/Tfb2 (IPR004598)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MIA_00497_1 MLELNSSVNDYLERLPEAVLTRLFQSPATCLAIFRLLPKLAKTIVLSMLYRDEPLPIEFVDTLVNNQSQRIQGEALKKLK GLHVVKERHQMLTLNPTLRQNFKNALTGSDGTSSFGVPCEIEDRYKVDIPFLDQRAQQKWEAILHYMVGTDTSGLPRSVL LLLEHSGLMGGDDLENMKITNVGFQFLLQDINAQIWTLLLQYLSMSDKLCMDHVDILNFIFMLGSLELGRDYSSASLSLT QTQMLQDLREYGIVYQRKSSSRRFYPTRLATTLTSDASAIRSASKSMEIAISAASGESRSSATSASSNSTSRPGTADADS SLTTFSSVSSGFIIIETNFRLYAYTNSPLQIAVLNLFVHLKSRFANMVAGNITRESVRSAFANGIKADQIIQYLTVHAHP QMAKNEPILPPTIVDQIKLWQIEMDRIRATEGYLFTNFSDFNEYNTIVNYANQLGVVVWQNAKMSKFFVTKEGNSQVIEY VNRRMQQQRNIPSAS
GO term prediction
Biological Process
GO:0006289 nucleotide-excision repair
Molecular Function
GO:0004003 ATP-dependent DNA helicase activity
Cellular Component
GO:0000439 core TFIIH complex
GO:0005634 nucleus