Protein

MIA_00362_1

Length
358 amino acids

Browser: contig01:1041467-1042544+

Protein function

EGGNOG:0PGQJRFC5replication factor C subunit
SGD closest match:S000000291RFC5Replication factor C subunit 5
CGD closest match:CAL0000201502RFC5Replication factor C subunit 5

Protein alignments

%idAln lengthE-value
MCA_05699_170.950%3580.0MCA_05699_1
A0A0J9X814_GEOCN68.347%3571.42e-176Similar to Saccharomyces cerevisiae YBR087W RFC5 Subunit of heteropentameric Replication factor C (RF-C) OS=Geotrichum candidum GN=BN980_GECA04s01880g PE=4 SV=1
A0A167F1B1_9ASCO66.197%3556.48e-168Replication factor C subunit 5 OS=Sugiyamaella lignohabitans GN=RFC5 PE=4 SV=1
A0A060T1J4_BLAAD63.739%3531.34e-159ARAD1C25124p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C25124g PE=4 SV=1
A0A1E3PDT3_9ASCO61.473%3531.84e-150Replication factor C subunit 5 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53229 PE=4 SV=1
UniRef50_Q8X08259.437%3551.45e-141Replication factor C subunit 5 n=83 Tax=Opisthokonta TaxID=33154 RepID=RFC5_NEUCR
Q6CB59_YARLI56.941%3531.95e-139YALI0C21692p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C21692g PE=4 SV=1
A0A1D8PG80_CANAL51.685%3561.18e-123Replication factor C subunit 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RFC5 PE=4 SV=1
A0A1E4TED6_9ASCO53.090%3562.31e-121Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_100606 PE=4 SV=1
RFC5_YEAST49.584%3613.37e-114Replication factor C subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RFC5 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0507

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 358

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR003593
    AAA+ ATPase domain
    1. SM00382 (AAA_5)
  3. Domain IPR008921
    DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
    1. SSF48019 (post-AAA+...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.8.60
  2. G3DSA:1.20.27...
  3. G3DSA:3.40.50...
  4. PF13177 (DNA_pol3_d...)
  5. cd00009 (AAA)

Residue annotation

  1. Walker A motif cd0...
  2. ATP binding site c...
  3. Walker B motif cd0...
  4. arginine finger cd...

Protein sequence

>MIA_00362_1
MSLWVDKYRPRSIEALTYHSALSSQLKALAASGDFPHILMYGPSGAGKKTRVMAVLKELYGNGAEKIKIASRVFQIGTSS
RKVEFNVVSSNYHIEFTPSDMGNNDRVVIQDLLKEIAQTQSVDTRSKNRFKTVVINEADSLSRDAQAALRRTMEKYSANI
RLILLANSTSNIISPIKSRTLLIRVAAPSTEEIGDAISLIAKKEKVSLPSDEEEQKELFEKLARLSHRNLRKCILMFEAM
YSASNGNVLSVTTPTPAPDWEQVIGKIADEILRNRTVANLLSIRGTLYDLIAHCIPPETILKTLTYELLHKANYNVGPSI
VETAAFYFHRLRQGSKAIFHIEACIAKYMQIIETFHTK

GO term prediction

Biological Process

GO:0006260 DNA replication

Molecular Function

GO:0003677 DNA binding

Cellular Component

None predicted.