Protein
MIA_00356_1
Length
990 amino acids
Browser: contig01:1027454-1030572+
Protein function
EGGNOG: | 0PHCW | PGUG_01462 | u5 small nuclear ribonucleoprotein component |
---|---|---|---|
SGD closest match: | S000001656 | SNU114 | Pre-mRNA-splicing factor SNU114 |
CGD closest match: | CAL0000191291 | SNU114 | U5 snRNP GTPase |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
MCA_01490_1 | 67.495% | 1006 | 0.0 | MCA_01490_1 |
A0A0J9XAK3_GEOCN | 59.476% | 992 | 0.0 | Similar to Saccharomyces cerevisiae YKL173W SNU114 GTPase component of U5 snRNP involved in mRNA splicing via spliceosome OS=Geotrichum candidum GN=BN980_GECA07s02419g PE=4 SV=1 |
A0A1E3PH89_9ASCO | 52.246% | 1024 | 0.0 | p-loop containing nucleoside triphosphate hydrolase protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52639 PE=4 SV=1 |
UniRef50_A0A1E3PH89 | 52.246% | 1024 | 0.0 | p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PH89_9ASCO |
A0A167F681_9ASCO | 55.484% | 930 | 0.0 | U5 snRNP GTPase SNU114 OS=Sugiyamaella lignohabitans GN=SNU114 PE=4 SV=1 |
A0A060T6H6_BLAAD | 50.101% | 992 | 0.0 | ARAD1C20130p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C20130g PE=4 SV=1 |
A0A1E4TKW9_9ASCO | 45.189% | 925 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_86108 PE=4 SV=1 |
Q6CGB0_YARLI | 42.672% | 1003 | 0.0 | YALI0A20768p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A20768g PE=4 SV=1 |
SN114_YEAST | 32.731% | 1051 | 8.59e-166 | Pre-mRNA-splicing factor SNU114 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNU114 PE=1 SV=1 |
A0A1D8PH71_CANAL | 34.394% | 974 | 1.90e-157 | U5 snRNP GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SNU114 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0496
Protein family membership
None predicted.
Domains and repeats
-
Domain
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Domain
1
100
200
300
400
500
600
700
800
900
990
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
-
-
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cd01683 (EF2_IV_snRNP)
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cd04090 (EF2_II_snRNP)
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cd04167 (Snu114p)
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mobidb-lite (disord...)
Residue annotation
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G1 box cd04167
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putative GEF inter...
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GTP/Mg2+ binding s...
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Switch I region cd...
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G2 box cd04167
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G3 box cd04167
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Switch II region c...
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G4 box cd04167
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G5 box cd04167
Protein sequence
>MIA_00356_1 MDEDLYDEFGNYIGPAEDENDEQAQESYVDNDSDNEYRHQTPDLDSAEADDNEREEETESSMMVVLHEDKRYYPTTEEVY GEGVETLLQEHDAQDLSEPIIAPLNTTTYIREEKDVPEMRYSWEWQANLMQFPDYIRNVALVGNIHHGKTSFLDLLINET HVLPVRDRAKQNEQLRYTDTHVLEQERGVTIKVSPMSLVLKNSKGKSFLTNIMDTPGHSNFLDEVSVASRYVDGFVLVVD VLEGLLNSTEQIISYAIREGLPLILVVNKIDRLILELKLPPNEAFYKIRYCIDQVNNYINKVSPFKNGKYKPLSPVSGNV VFASSTCNFMFSLYTFALKYKENFPEIDAEVFSKRLWGDIFYNKSTRKFTKKNLAKGTRRSFEHFILEPLYKIFTHTMEE EKETLEETLEKLNISLKPATYRLDVKPLLQTVCSLFFGDSSAFVNALLEHIPAPSQGGTSRIVQKHYTGPKDGIEVEAME KCDPQGPLVVHIAKLINTPNASGFYALGRVMSGTLHKGVPVSVLGENYSSYDTEDMQECTISDLWIYQSRYKVPVDGIPA GNWALIGGVDPSIVKVATIFMTNQFPEESMHIFSPIKYIGQPVFKVAVEPFNPSELPKLLDGLRNIRKSYSVVQTKAEES GEHVIIGTGELYMDCILYDLRTLYTNIQIKVSDPVAKFAETCLETSAIRAYTETPNKHNKITVIAEPLDPEIAADIEQGL IQTPGTNGWTTKKAAKFFQEKYNWDAMSALSIWDFGPESAKENILQDDTLSDEVDKKAMKAIRDSVKQGFKWAMRDGPLC DEPILNVRFKIIEAELSDDPSQRNSSQIISTARRACYSAFLLASPRLMEPLYFFEILVNYDSVNFIKSIVDRRRGHVDMD KPISGTPLRIVTGDIPVIDSVGFETDIRVVTQGSAFISALTFYKWSIVPGDPLDKSQIFRPLEVSPTFAMAREFVVKTRR RKGLSDEPTITKYLDESLLESLKETGLLDE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
Cellular Component
None predicted.