Protein

MIA_00320_1

Length
1,199 amino acids

Browser: contig01:919709-923427+

Protein function

EGGNOG:0PH55SMC2structural maintenance of chromosomes protein
SGD closest match:S000001927SMC2Structural maintenance of chromosomes protein 2
CGD closest match:CAL0000192877SMC2Structural maintenance of chromosomes protein

Protein alignments

%idAln lengthE-value
MCA_05694_157.987%12020.0MCA_05694_1
A0A0J9XJR3_GEOCN55.463%11990.0Structural maintenance of chromosomes protein OS=Geotrichum candidum GN=BN980_GECA22s01209g PE=3 SV=1
A0A060SZ72_BLAAD51.836%11980.0Structural maintenance of chromosomes protein OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C02948g PE=3 SV=1
UniRef50_B2WMG048.195%11910.0Structural maintenance of chromosomes protein n=25 Tax=leotiomyceta TaxID=716546 RepID=B2WMG0_PYRTR
Q6C0G9_YARLI46.070%11960.0Structural maintenance of chromosomes protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F24783g PE=3 SV=1
A0A1D8PI59_CANAL45.333%12000.0Structural maintenance of chromosomes protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SMC2 PE=3 SV=1
SMC2_YEAST45.409%11980.0Structural maintenance of chromosomes protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMC2 PE=1 SV=1
A0A167EUU2_9ASCO48.311%10660.0Condensin subunit SMC2 OS=Sugiyamaella lignohabitans GN=SMC2 PE=4 SV=1
A0A1E4TCA6_9ASCO38.493%12210.0Structural maintenance of chromosomes protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_139250 PE=3 SV=1
A0A1E3PLP0_9ASCO30.894%2466.38e-24Structural maintenance of chromosomes protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50270 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2019

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 200 400 600 800 1000 1199

Detailed signature matches

  1. Family IPR024704
    Structural maintenance of chromosomes protein
    1. PIRSF005719 (SMC)
  2. Domain IPR027120
    Smc2, ATP-binding cassette domain
    1. cd03273 (ABC_SMC2_euk)
  3. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  4. Domain IPR003395
    RecF/RecN/SMC, N-terminal
    1. PF02463 (SMC_N)
  5. Domain IPR010935
    SMCs flexible hinge
    1. PF06470 (SMC_hinge)
    2. SM00968 (SMC_hinge_2)
    3. SSF75553 (Smc hinge...)
  6. Domain IPR002048
    EF-hand domain
    1. PS50222 (EF_HAND_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.10.28...
  3. G3DSA:1.20.14...
  4. G3DSA:3.40.50...
  5. mobidb-lite (disord...)

Residue annotation

  1. Walker A/P-loop cd...
  2. ATP binding site c...
  3. Q-loop/lid cd03273

Protein sequence

>MIA_00320_1
MKLEELIIDGFKSYATRTVISNWDPQFNCITGLNGSGKSNILDAICFVLGITSMSTMRAQNLQDLIYKRGQAGVTKASVT
IVFDNSDKTTSPLNFQDSLTISVTRQIVMGGTSKYLINGHRAQQQSVQELFQSVQLNINNPNFLIMQGKITKVLNMKPAE
ILNQIEEAAGTKMFEDRRERAIKTMAKKERKLTESTDLLKDEIIPKLNKLRREKLEVIEYEKTVLDLENKTNILVSYDYD
HIKKNLEKQSETWRSRKSHLSALENLVPKSKSEIESLNQQISEIKAKREKDLLSGAEGSGGSLKHLEQKCKDLSQESARI
KTLSELKQTGLKEARQTFKKLSSTLGDFESRVSDRGGLLSQLEKDYNEAKEEYQLAAKEKDKKEELLQSLQTGVASKEGQ
ESGYNNEIQQVRNSIAVANTSKAKYEARLESLRHEIERDRNKVSNAQAQIELSKKELEEFKKQQEAISENMAKSGFVPER
LNDLTTKEHELDSQLRDITHKIDLAKKKFSNIDFKYNMSRNINFDPAGVKGVVAQLFTLEEKNYDKATALEVCAGGRLYQ
VVVDTDFTASQLLKHGNLKHRVTIIPLNKVNSPAFLKMADKLNAAKNLAPGKVNLALDLIGYQKDVEKAMQYVFGGTLVC
LDSEAAKLVAFNPQVHVTTVTLDGDVYDPNGTLSGGSQRNNNRQDSNSANSDEIGPNDGLLISLQKIHKMMHRQKILQTD
LEDLKNQIRMETALSNKCRALKKEYDLKQHEIALTEKKLKEGPFARVLQLFEERQTQIKELEEEMVRTEKTISEGAVEIK
RIEQDMKEFDNNKSGKLDELQRLVTKLQKNAAERLITVQEKQKLLQNAQIENEQTSSDFENLKEEKDRAQKTVEELEPEV
KELEEQYKVVCSKEKTYRERLDQEKTRLMGLDEELMALEKTLTIKTKFLSENTHKIQKINHEMDNIKEEVEKFNAILNRL
KSEHPWILEHHQNFGKPGTPYDYNSEINNISRIRMEVSKLKERAKSMKQHHNSTVRNVIDTMEKKEEELKKMIRTLEKDK
SKIETTIVQLDEYKKKKLEETWIKVSRDLGKIFGELLPGNSSKLVPLEGKEVSDGLEIKVQLGGVWKESLSELSGGQRSL
VALALILALLQFKPAPMYILDEVDAALDLNHTQNIGQLIKTRFHGSQFIVVSLKEGMFTNANRVFRTRFTEGTSTVSVS

GO term prediction

Biological Process

GO:0051276 chromosome organization

Molecular Function

GO:0005509 calcium ion binding
GO:0005515 protein binding
GO:0005524 ATP binding

Cellular Component

GO:0005694 chromosome