Protein

MIA_00165_1

Length
239 amino acids

Browser: contig01:461622-462362+

Protein function

EGGNOG:0PFTZINO80DNA helicase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair (By similarity)
SGD closest match:S000003118INO80Putative DNA helicase INO80
CGD closest match:CAL0000196418INO80Putative DNA helicase INO80

Protein alignments

%idAln lengthE-value
A0A0J9XH26_GEOCN61.574%2162.72e-70Similar to Saccharomyces cerevisiae YGL150C INO80 ATPase and nucleosome spacing factor OS=Geotrichum candidum GN=BN980_GECA16s00351g PE=4 SV=1
A0A167CPE9_9ASCO61.194%2018.83e-68Chromatin-remodeling ATPase INO80 OS=Sugiyamaella lignohabitans GN=INO80 PE=4 SV=1
UniRef50_A0A167CPE961.194%2012.42e-64Chromatin-remodeling ATPase INO80 n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167CPE9_9ASCO
A0A060T5P2_BLAAD61.611%2113.91e-67ARAD1B05720p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B05720g PE=4 SV=1
MCA_01987_165.500%2001.59e-66MCA_01987_1
Q6C6J7_YARLI72.358%1232.44e-52YALI0E09012p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E09012g PE=4 SV=2
A0A1E4TI66_9ASCO50.725%2072.27e-52Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19857 PE=4 SV=1
A0A1E3PF31_9ASCO82.000%1008.78e-52Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52805 PE=4 SV=1
INO80_YEAST78.641%1032.69e-46Putative DNA helicase INO80 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=INO80 PE=1 SV=1
INO80_CANAL59.615%1042.06e-37Putative DNA helicase INO80 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=INO80 PE=3 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.3226

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 239

Detailed signature matches

  1. Domain IPR001650
    Helicase, C-terminal
    1. PS51194 (HELICASE_CTER)
    2. SM00490 (helicmild6)
    3. PF00271 (Helicase_C)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.50...
  3. cd00079 (HELICc)
  4. mobidb-lite (disord...)

Residue annotation

  1. nucleotide binding...
  2. ATP-binding site c...

Protein sequence

>MIA_00165_1
MQYMSTSTLQDGRRNLVNDWQTKPEWFVFLLSTRAGGWGINLTPTDTVIFYDSDWNPTIDPQAMDRAHRMGQTRQVTAYR
LPVKDTIAGRMRDRAKQKMHVQQVVMGGDGVAKSGADFQKPGREVVCWLLDDDATADALIKKNQEEVAAAQSNKREGRRN
ARPILVARTLRPGAAGVHPAKKAKVRGIEYMYHEDEGNFDESTNPRLRGTPSGSGTVTHTAESAAKAAPAAPAVLKKGR

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.