Protein

MIA_00003_1

Length
895 amino acids

Browser: contig01:5822-8556+

Protein function

EGGNOG:0QDZFReverse transcriptase (RNA-dependent DNA polymerase)
CGD closest match:CAL0000185137orf19.2669Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A5DXY548.10%5013e-146Uncharacterized protein n=2 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DXY5_LODEL
MCA_01665_139.31%4964e-103MCA_01665_1
A0A161HJI4_9ASCO29.29%4957e-59Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1
YCH4_YEAST38.38%2842e-62Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2
A0A1D8PLS1_CANAL25.89%5603e-46Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2669 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2348
Predicted cleavage: 12

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 895

Detailed signature matches

  1. Domain IPR013103
    Reverse transcriptase, RNA-dependent DNA polymerase
    1. PF07727 (RVT_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF56672 (DNA/RNA p...)
  2. cd09272 (RNase_HI_R...)
  3. mobidb-lite (disord...)

Residue annotation

  1. active site cd09272
  2. RNA/DNA hybrid bin...

Protein sequence

>MIA_00003_1
MRVFGCRANVVIADAKRESKLSSNIDPASLSGTRWIALLTGIVEARDVYFDESQFPFMKSDKELSSNASGIAFGIGCGSG
SMSGPRADCNDSGTGSSVGLNSIAGSNSSSGSSFGSRRSLPDVTSVSGSGSSASSTSGLLVPRRLRRCLRLLPRSVRRIL
PSSSAPLESPTLPSLPSSPILPSSDQDPSVSSPIGPSQSDLSQVGSPSGESDNSGDSGISQRGGDIGFHPDVIASSPSPP
SVELEIVPLDQEPPSSDLVKSLDQAGVSVDTKNDTQAILPKSRSRVVAVRLPSVTPAKRPSSHDFVAPPSKHRCDDSAKQ
PALSVVPAKRRAEQESISYRRLKSLRFEYDDVALLVFTDPTTFEQAMSSEDAEFWLEACVVEMSSLKRNRTWDLVDLPPG
RKAINSKWVFKIKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGD
LKEDIYMRQPKGFIVKGQESKVCHLNKSLYGLKQAPLCWNEKIHGALVKLGFVRNESDYGVYTKGRGSAMVIIALYVDDL
LIAGNSTQAIANTKSSLSSMFKMKDLGLVEQFLGMRVKQSPYHITVDVCRYIVDMLEEFGMQNCSSVKTPLPTRDLSDFS
ESDAAADPSLYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSMHMEAAKHTLRYLKGSAQLGLEYRAQKVYKLVGYS
DADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCQIPVPLPVTMFEDNQ
GCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGLLGMKAVGDSATRGGVE
HAMLSQTSACENCWK

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.