Protein

MCA_06319_1

Length
1,393 amino acids


Gene name: PUF3

Description: mRNA-binding protein PUF3

Browser: contigD:3851536-3855718-

RNA-seq: read pairs 2408, FPKM 21.3, percentile rank 43.0% (100% = highest expression)

Protein function

Annotation:PUF3mRNA-binding protein PUF3
EGGNOG:0PGRIPUF3mRNA binding protein Pumilio 2
SGD closest match:S000003936PUF3mRNA-binding protein PUF3
CGD closest match:CAL0000187550PUF3mRNA-binding protein

Protein alignments

%idAln lengthE-value
MIA_04504_164.47%3492e-156MIA_04504_1
A0A060T1G3_BLAAD58.07%3533e-143ARAD1C20284p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C20284g PE=4 SV=1
UniRef50_A0A060T1G358.07%3538e-140ARAD1C20284p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T1G3_BLAAD
A0A0J9YHB9_GEOCN57.18%3839e-142Similar to Saccharomyces cerevisiae YGL178W MPT5 Member of the Puf family of RNA-binding proteins OS=Geotrichum candidum GN=BN980_GECA01s02122g PE=4 SV=1
A0A167D7D5_9ASCO58.26%3573e-138mRNA-binding protein PUF3 OS=Sugiyamaella lignohabitans GN=PUF3 PE=4 SV=1
A0A1E3PMR1_9ASCO57.51%3461e-130ARM repeat-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50632 PE=4 SV=1
Q6C669_YARLI55.46%3575e-123YALI0E12001p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E12001g PE=4 SV=1
A0A1D8PMA5_CANAL51.04%3357e-103mRNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PUF3 PE=4 SV=1
PUF3_YEAST49.16%3586e-103mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUF3 PE=1 SV=1
A0A1E4TM35_9ASCO43.11%3412e-93Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20765 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0015

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 200 400 600 800 1000 1200 1393

Detailed signature matches

    1. SSF48371 (ARM repeat)
    1. PS50303 (PUM_HD)
    1. cd07920 (Pumilio)
    1. PS50302 (PUM)
    2. PF00806 (PUF)
    3. SM00025 (pum_5)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Residue annotation

  1. RNA binding site c...

Protein sequence

>MCA_06319_1
MVYYDCGCLDGQPLGAEFGPSSECTSHASQPPASKKCQGSTLGLFPHQNNSTQFLPSFPSTSPPTYTSNNITTTSNLHQQ
DTLQNTSCAAQNFSTLESNPLSGSKINTQPLFNYQSQQFESSDSSTTLQDPSNLDSTIPPIAFSEDPSHSKLTSQPPYIS
YPLLQNGQPSNTVLFSPNSSILPLGLRTFGLGTTVSSASVLIKSKSQTSQTSSNLQSTSSSSSVVPFLLATTVPVSFKAL
AANSTAEKSINLQGETTEFKESVNSPIANRSISPTSSTNTANYSPTSPSTSLSSSAASSAPVLDLTSSNHLDGFTNQHNT
TQGLPNNHKDSQHNIIIAASYDTNTPESPLSVDNIKDLNDSNQKSSTVSSNPSTLTVSASAEASKETGSLKDNGSLNEDQ
NHSSPIMLSPSTALSQQRDESPSSKSGGKNGTVVYNNHHFVQQFNSPHAILAHINGNPNSSFPSLTSPSLANTTTISQPS
ATVSSRRSSGIYDSKFFPDGFDSNSRHSSISSVSHQDYKNTNISAPLLTSSANRSSANSPPPQMLLQQQQHYPLLDQSPQ
TMSLTSTRSTPSNTNSIPFRASPRFNPVSLSSLPSSQQQPVTPQRSQVQAFHATTLSSTIVNANSSLDAFLERFSAIGET
TRGVESMALSTSESQGLSRHNSRADSFDSSNGRTSPLHNGTTSNVHSPSPSHGVFTSNYSSTNSLWQAPQSQQSNFSNAS
SSALGSSSSTVVSPMLVHAETNNPSANMNTINSAFSPRSGFDAFGTSNPASLVNSPQSHADVRSPFVQSQFSSVFTSPSY
TSSSVYAISQQQQQQQYFQPISNPASRHNSYIESTEQDYSYRSPSLSQQGLERTSYVLNRTPPSAARASPLFSNPSLNVA
SNSSNSMKSNGTSATNYPERNLRQHLVYQQQQQQIHANNGSAYSPSLGQASVNNGGINPIGSPNSAHANTNHRNFKFNPH
STFNQQRPNFYSPVPPHDLPPSTSNGYTSQAQGHFHPGAQNIPPTSSQASGSGPRRSYDVSSGSVRSQLLEEFRGNKLKK
YELRDIFGHIVEFSGDQYGSRFIQSKLEMATSEEKEIVFNELKLDALQLMKDVFGNYVIQKFFELGNQIQKTILAKQMEG
NMLTLSLQMYGCRVVQKAIEFILTEQQARLISELKDHVMQCIQDQNGNHVIQKAIERIPTQYIQFILQTYKENSYKLCIH
PYGCRVIQRMLEFGDEETKQGLLNNLHQFTKTIINDQYGNYVLQHVIERGQDEDRDKMIETILAMLVKCSQHKFASNVVE
KAIIFGRPEHRLRVVDIILGSDSKDKKQNTTETSPLQTMMKDQYANYVIQKLLERAEPEQKIRLLIGIRPLIEPLKKMQI
GKHIAAIEKLVDSYEKEYNVKPSTSFTSENGSN

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003723 RNA binding
GO:0005488 binding

Cellular Component

None predicted.