Protein
MCA_06206_1
Length
118 amino acids
Gene name: TOP3A
Description: DNA topoisomerase 3
Browser: contigD:3558595-3559017+
RNA-seq: read pairs 37, FPKM 3.8, percentile rank 15.5% (100% = highest expression)
Protein function
| Annotation: | TOP3A | DNA topoisomerase 3 | |
|---|---|---|---|
| EGGNOG: | 0PJ78 | TOP3 | DNA Topoisomerase |
| SGD closest match: | S000004224 | TOP3 | DNA topoisomerase 3 |
| CGD closest match: | CAL0000178060 | orf19.5934 | DNA topoisomerase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| UniRef50_A0A0L0SRU7 | 42.55% | 94 | 3e-14 | DNA topoisomerase n=1 Tax=Allomyces macrogynus ATCC 38327 TaxID=578462 RepID=A0A0L0SRU7_ALLMA |
| MIA_01657_1 | 54.17% | 72 | 7e-17 | MIA_01657_1 |
| Q5ANG9_CANAL | 42.86% | 91 | 1e-14 | DNA topoisomerase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5934 PE=3 SV=1 |
| TOP3_YEAST | 42.31% | 78 | 1e-14 | DNA topoisomerase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOP3 PE=1 SV=1 |
| A0A0J9XKM4_GEOCN | 45.95% | 74 | 6e-14 | DNA topoisomerase OS=Geotrichum candidum GN=BN980_GECA24s00087g PE=3 SV=1 |
| A0A060T6F5_BLAAD | 41.79% | 67 | 8e-13 | DNA topoisomerase OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B11726g PE=3 SV=1 |
| A0A161HHI9_9ASCO | 41.33% | 75 | 1e-12 | DNA topoisomerase OS=Sugiyamaella lignohabitans GN=TOP3 PE=3 SV=1 |
| A0A1E4TD21_9ASCO | 47.76% | 67 | 2e-11 | DNA topoisomerase OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_140658 PE=3 SV=1 |
| Q6C0R0_YARLI | 38.27% | 81 | 2e-09 | DNA topoisomerase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F22495g PE=3 SV=1 |
| A0A1E3PHR5_9ASCO | 46.30% | 54 | 2e-09 | DNA topoisomerase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_70460 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0098
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
20
40
60
80
100
118
Detailed signature matches
-
-
SSF56712 (Prokaryot...)
-
no IPR
Unintegrated signatures
-
-
cd01028 (TOPRIM_TopoIA)
Residue annotation
-
putative metal-bin...
-
active site cd01028
-
interdomain intera...
-
nucleotide binding...
Protein sequence
>MCA_06206_1 MISITLFLNEIDALWQVDPSLLFNTRLKTIVPDSNKDLVSNIQAESRNADYLYIWTNNDREGEHIGYEILDAARKTNPRL TDEYVKRTRKSTISLQKLFIKKLKNIISIVCCNIILTV
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.