Protein

MCA_06028_1

Length
478 amino acids


Browser: contigD:3065124-3066561+

RNA-seq: read pairs 1946, FPKM 50.2, percentile rank 65.5% (100% = highest expression)

Protein function

KEGG:K12393AP1M AP-1 complex subunit mu
EGGNOG:0PGQFFG08982.1complex, subunit
SGD closest match:S000006180APM1AP-1 complex subunit mu-1-I
CGD closest match:CAL0000186413APM1Apm1p

Protein alignments

%idAln lengthE-value
MIA_05067_177.96%4810.0MIA_05067_1
A0A0J9X6B2_GEOCN65.77%4850.0Similar to Saccharomyces cerevisiae YPL259C APM1 Mu1-like medium subunit of the clathrin-associated protein complex (AP-1) OS=Geotrichum candidum GN=BN980_GECA03s00197g PE=3 SV=1
A0A060THJ5_BLAAD57.74%4780.0ARAD1D31526p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D31526g PE=3 SV=1
A0A161HFH7_9ASCO52.65%5280.0Apm1p OS=Sugiyamaella lignohabitans GN=APM1 PE=3 SV=1
A0A1E3PGC3_9ASCO52.93%4956e-170Clathrin adaptor, mu subunit OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52754 PE=3 SV=1
UniRef50_A0A1E3PGC352.93%4952e-166Clathrin adaptor, mu subunit n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PGC3_9ASCO
A0A1E4TG63_9ASCO49.58%4742e-164Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_110094 PE=3 SV=1
Q6CEZ3_YARLI47.72%4822e-158YALI0B11682p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B11682g PE=3 SV=1
AP1M1_YEAST45.18%4984e-151AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APM1 PE=1 SV=2
Q5AJY4_CANAL46.46%4802e-146Apm1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APM1 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1950

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 478

Detailed signature matches

    1. PIRSF005992 (AP_com...)
    2. PR00314 (CLATHRINADPT)
    1. SSF64356 (SNARE-like)
    1. PF01217 (Clat_adapt...)
    1. SSF49447 (Second do...)
    2. PF00928 (Adap_comp_sub)
    3. PS51072 (MHD)
    1. PS00990 (CLAT_ADAPT...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd09250 (AP-1_Mu1_C...)

Residue annotation

  1. heterotetramer int...
  2. signal peptide bin...

Protein sequence

>MCA_06028_1
MTISAIFFLDSKGKPLLSRNYKGDIPITSAIEEFPKILVSAQQESTSIPPCINKNGINYIFITHNDIFILGLSKQNSNAS
AVLYFFHQLLETLTQYLNNLDEETIRDNFVIIYELLDEMMDFGHPQISDYKVLQEYITQDSHPASASASSIVTNAVSWRP
DGIFYKKNELFLDVIESVEFLLGADGKIIHNNVLGKVSVNAYLSGMPNLKLGLNDVDKKILQQQARERETGEVEPTKPKK
RIGSKQVHLEDVKFHQCVELDQFEADRTITFTPPDGKFDLLTYRVSNLASRPLFLVDATVAVKSRSRAIVNVTVKSQFRK
RSTASFVEISIPVPPDADSPKFKTTAGTVVYAPEKNAIVWKLKDFPGGVEYKMKTQIQLSSLTGQMDDEEFYNENTNGVS
SGAASVDSAVAFKTATINRIKTQPISVKFEIPYFAVSGLQVRYLKVEEPRLKYQSLPWVRYLTQSGEYQIRLPPQNVF

GO term prediction

Biological Process

GO:0006810 transport
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport

Molecular Function

None predicted.

Cellular Component

GO:0030131 clathrin adaptor complex