MCA_05971_1

Protein

Length

1,169 amino acids

Gene name: RPA135

Description: DNA-directed RNA polymerase I subunit RPA135

Browser: contigD:2900275-2903873+

RNA-seq: read pairs 4139, FPKM 43.7, percentile rank 62.4% (100% = highest expression)

Protein function

Annotation:		RPA135	DNA-directed RNA polymerase I subunit RPA135
KEGG:	K03002	RPA2	DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
EGGNOG:	0PFMF	FG05627.1	dna-directed rna polymerase
SGD closest match:	S000006214	RPA135	DNA-directed RNA polymerase I subunit RPA135
CGD closest match:	CAL0000201405	RPA135	DNA-directed RNA polymerase subunit beta

Protein alignments

	%id	Aln length
MIA_00439_1	83.23%	1169	MIA_00439_1
A0A0J9XCF1_GEOCN	73.56%	1165	DNA-directed RNA polymerase subunit beta OS=Geotrichum candidum GN=BN980_GECA09s01055g PE=3 SV=1
A0A1E3PPM7_9ASCO	73.14%	1169	DNA-directed RNA polymerase subunit beta OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50775 PE=3 SV=1
A0A060TIY2_BLAAD	73.13%	1165	DNA-directed RNA polymerase subunit beta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D42196g PE=3 SV=1
A0A1D8PQM4_CANAL	72.93%	1171	DNA-directed RNA polymerase subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPA135 PE=3 SV=1
A0A161HI57_9ASCO	74.67%	1058	DNA-directed RNA polymerase subunit beta OS=Sugiyamaella lignohabitans GN=RPA135 PE=3 SV=1
UniRef50_A0A161HI57	74.67%	1058	DNA-directed RNA polymerase subunit beta n=6 Tax=saccharomyceta TaxID=716545 RepID=A0A161HI57_9ASCO
RPA2_YEAST	68.43%	1191	DNA-directed RNA polymerase I subunit RPA135 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPA135 PE=1 SV=1
Q6C6G0_YARLI	67.67%	1166	DNA-directed RNA polymerase subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E09845g PE=3 SV=1
A0A1E4TIB9_9ASCO	65.64%	1170	DNA-directed RNA polymerase subunit beta OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_71761 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0526

Protein family membership

DNA-directed RNA polymerase, subunit 2 (IPR015712)

Domains and repeats

Domain
31 - 422
RNA polymerase, beta subunit, protrusion (IPR007644)
Domain
191 - 380
RNA polymerase Rpb2, domain 2 (IPR007642)
465 - 529
RNA polymerase Rpb2, domain 3 (IPR007645)
570 - 628
DNA-directed RNA polymerase I subunit RPA2, domain 4 (IPR009674)
676 - 1,040
DNA-directed RNA polymerase, subunit 2, domain 6 (IPR007120)
1,042 - 1,164
RNA polymerase Rpb2, domain 7 (IPR007641)

1 200 400 600 800 1000 1169

Detailed signature matches

IPR015712

DNA-directed RNA polymerase, subunit 2
1. cd00653 (RNA_pol_B_...)
  
  32 - 1,164
  
  CDD
  cd00653 (RNA_pol_B_RPB2)
IPR007644

RNA polymerase, beta subunit, protrusion
1. PF04563 (RNA_pol_Rp...)
  
  31 - 422
  
  Pfam
  PF04563 (RNA_pol_Rpb2_1)
IPR007642

RNA polymerase Rpb2, domain 2
1. G3DSA:3.90.11...
  
  203 - 371
  
  GENE3D
  G3DSA:3.90.1110.10 (G3DSA:3.90.1110.10)
2. PF04561 (RNA_pol_Rp...)
  
  191 - 380
  
  Pfam
  PF04561 (RNA_pol_Rpb2_2)
IPR007645

RNA polymerase Rpb2, domain 3
1. PF04565 (RNA_pol_Rp...)
  
  465 - 529
  
  Pfam
  PF04565 (RNA_pol_Rpb2_3)
IPR009674

DNA-directed RNA polymerase I subunit RPA2, domain 4
1. PF06883 (RNA_pol_Rp...)
  
  570 - 628
  
  Pfam
  PF06883 (RNA_pol_Rpa2_4)
IPR007120

DNA-directed RNA polymerase, subunit 2, domain 6
1. G3DSA:2.40.27...
  
  676 - 1,026
  
  GENE3D
  G3DSA:2.40.270.10 (G3DSA:2.40.270.10)
2. PF00562 (RNA_pol_Rp...)
  
  677 - 1,040
  
  Pfam
  PF00562 (RNA_pol_Rpb2_6)
IPR007641

RNA polymerase Rpb2, domain 7
1. PF04560 (RNA_pol_Rp...)
  
  1,042 - 1,164
  
  Pfam
  PF04560 (RNA_pol_Rpb2_7)
IPR007121

RNA polymerase, beta subunit, conserved site
1. PS01166 (RNA_POL_BETA)
  
  889 - 901
  
  PROSITE patterns
  PS01166 (RNA_POL_BETA)

no IPR

Unintegrated signatures

G3DSA:3.90.11...

25 - 202

GENE3D
G3DSA:3.90.1100.10 (G3DSA:3.90.1100.10)
G3DSA:3.90.18...

1,043 - 1,158

GENE3D
G3DSA:3.90.1800.10 (G3DSA:3.90.1800.10)
SSF64484 (beta and ...)

11 - 1,107

SUPERFAMILY
SSF64484 (beta and beta-prime subunits of DNA dependent RNA-polymerase)

1,134 - 1,166

SUPERFAMILY
SSF64484 (beta and beta-prime subunits of DNA dependent RNA-polymerase)

Residue annotation

RPB12 interaction ...

111R

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)

777H

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)

818D

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)

820D

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)

824M

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)

825I

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)

826G

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)

828M

RPB12 interaction site
111R, 777H, 818D, 820D, 824M, 825I, 826G, 828M
CDD
cd00653 (RNA_pol_B_RPB2)
RPB1 interaction s...

494T

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

496R

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

497K

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

498L

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

500P

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

503W

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

508P

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

667E

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

685D

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

686F

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

687N

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

689S

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

752V

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

753I

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

754S

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

755Y

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

758Y

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

760M

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

761D

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

762D

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

899K

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

901V

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

903S

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

925N

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

927H

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

930P

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

933M

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

938F

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

942L

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

959W

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

990S

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

998R

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

999V

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,000D

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,002Y

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,015V

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,018K

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,019F

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,020Q

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,022R

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,023S

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,044I

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,045R

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,046V

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,050E

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,052D

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,053A

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,055I

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,057H

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,058G

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,059A

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,060A

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,061Y

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,062L

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,064Q

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,065D

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,066R

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,067L

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,068L

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,069N

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,073Y

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,144P

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,148K

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,150L

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,152S

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,153E

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,155S

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,157M

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,158G

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,159I

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,160Q

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,162R

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)

1,164D

RPB1 interaction site
494T, 496R, 497K, 498L, 500P, 503W, 508P, 667E, 685D, 686F, 687N, 689S, 752V, 753I, 754S, 755Y, 758Y, 760M, 761D, 762D, 899K, 901V, 903S, 925N, 927H, 930P, 933M, 938F, 942L, 959W, 990S, 998R, 999V, 1,000D, 1,002Y, 1,015V, 1,018K, 1,019F, 1,020Q, 1,022R, 1,023S, 1,044I, 1,045R, 1,046V, 1,050E, 1,052D, 1,053A, 1,055I, 1,057H, 1,058G, 1,059A, 1,060A, 1,061Y, 1,062L, 1,064Q, 1,065D, 1,066R, 1,067L, 1,068L, 1,069N, 1,073Y, 1,144P, 1,148K, 1,150L, 1,152S, 1,153E, 1,155S, 1,157M, 1,158G, 1,159I, 1,160Q, 1,162R, 1,164D
CDD
cd00653 (RNA_pol_B_RPB2)
RPB10 interaction ...

725Q

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

726S

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

747N

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

749V

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

770V

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

773R

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

908A

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

921D

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

948A

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

949L

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

951G

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

986E

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)

1,003I

RPB10 interaction site
725Q, 726S, 747N, 749V, 770V, 773R, 908A, 921D, 948A, 949L, 951G, 986E, 1,003I
CDD
cd00653 (RNA_pol_B_RPB2)
RPB11 interaction ...

758Y

RPB11 interaction site
758Y, 772E, 907P, 992V
CDD
cd00653 (RNA_pol_B_RPB2)

772E

RPB11 interaction site
758Y, 772E, 907P, 992V
CDD
cd00653 (RNA_pol_B_RPB2)

907P

RPB11 interaction site
758Y, 772E, 907P, 992V
CDD
cd00653 (RNA_pol_B_RPB2)

992V

RPB11 interaction site
758Y, 772E, 907P, 992V
CDD
cd00653 (RNA_pol_B_RPB2)
RPB3 interaction s...

772E

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

773R

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

777H

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

881R

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

883P

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

908A

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

909I

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

910N

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

913F

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

915E

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

916T

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

991G

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

992V

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

993T

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

994G

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

995E

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

996E

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

997L

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

998R

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

1,000D

RPB3 interaction site
772E, 773R, 777H, 881R, 883P, 908A, 909I, 910N, 913F, 915E, 916T, 991G, 992V, 993T, 994G, 995E, 996E, 997L, 998R, 1,000D
CDD
cd00653 (RNA_pol_B_RPB2)

Protein sequence

>MCA_05971_1
MGTASFHTLERENYFRNPPSDKPFYPLLTAAVSPHVDSFNALLDGPDGGLLNLGVKDIGTKVAFDTTNTSQFHGNKLSFR
IDNVQILKPAPKQLDKSTIDRKTYPTECRERLVSYRGRLILRMCYSVNDGPEKLETIDAGLIPVMVMSNRCNLEGMAPDQ
LVAHHEESEELGGYFIINGLEKIIRLLIVQRRNHPLAIVRPSFANRGKSYTQFGVQIRSVRPDQTSQSIVLHYLADGNVT
LRFSWRKNEYLVPVVMILKALIETNDRAIFDGIVGDDTSNSFLTDRLELLLRSYKSFGLRSQKDALAYLGDKFRVVFRIP
KDMSDVDAGKHVLDKIILVHLQNDNDAKFRMILFMIRKLYSLVSGECCPDNPDAAQHQEILVGGFLYGMIVKEKIEEYLN
SIQDQVRSDLNTRQGVDFNEPKYMRRLFTRVNNNIGQKLQYFLSTGNLVSSSGLDLQQVSGYTVIAEKLNYHRFISHFRM
VHRGSFFAQLKTTTVRKLLPESWGFLCPVHTPDGSPCGLLNHLAHKCKIITEQVDSSSIPQVLTDLGVLPPTALVSGPKA
CVVQLDGKILGWTTHEKGRKIADIIRYWKINKPELKIPKTLEIGYVPPSRGGQYPGLFLFTQQSRMTRPVKYLPTSNEDW
VGPFEQVYMNIAITPDEIERNIHTHVEFSPTNILSILANMTPFSDFNQSPRNMYQCQMGKQTMGTPGTALVHRSDNKLYQ
LQGGQSPIVRANLFDEYGLDNYPNGTNAVVAVISYTGYDMDDAMIINKSVHERGFAHGSIYKVEHINLDEKRRRGDPITM
HFGFGPDDWPAEFKRILDDDGLPMIGSMVTEGDPLCAYYDETLGKTKFSIYKSSEVAYVEDVKLLGDENDSEFQRFTVKL
RVPRSPLIGDKFSSRHGQKGVCSQKWPAINMPFTETGMQPDIIINPHAFPSRMTIGMFVESLAGKAGALHGTAQDSTPWM
FNEENRAADYFGEQLIKSGYNYYGNEPMYSGVTGEELRVDIYIGLVFYQRLRHMVNDKFQVRSTGPVNSLTMQPVKGRKR
HGGIRVGEMERDALIGHGAAYLLQDRLLNCSDYTQTFLCTECGSLLTPQRSVPRVGGSPVVRCRRCATDASRGQSNDDLS
REVWEDGTGKRFKGGDKISAVAIPFVLKYLDSELSAMGIQMRFDVSPKP

GO term prediction

Biological Process

GO:0006351 transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0032549 ribonucleoside binding

Cellular Component

GO:0005634 nucleus

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Entry type

Status

Per-residue features