Protein
MCA_05698_1
Length
269 amino acids
Gene name: MRPL16
Description: 54S ribosomal protein L16, mitochondrial
Browser: contigD:2069702-2070512+
RNA-seq: read pairs 3872, FPKM 177.2, percentile rank 86.6% (100% = highest expression)
Protein function
| Annotation: | MRPL16 | 54S ribosomal protein L16, mitochondrial | |
|---|---|---|---|
| EGGNOG: | 0PFN9 | MRPL16 | mitochondrial 54S ribosomal protein YmL47 |
| SGD closest match: | S000000134 | MRPL16 | 54S ribosomal protein L16, mitochondrial |
| CGD closest match: | CAL0000192561 | orf19.2019 | Mitochondrial 54S ribosomal protein YmL47 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00363_1 | 75.56% | 225 | 3e-126 | MIA_00363_1 |
| A0A0J9X6Z5_GEOCN | 70.42% | 213 | 2e-104 | Similar to Saccharomyces cerevisiae YBL038W MRPL16 Mitochondrial ribosomal protein of the large subunit OS=Geotrichum candidum GN=BN980_GECA04s01891g PE=3 SV=1 |
| A0A060T2G6_BLAAD | 65.98% | 194 | 2e-87 | ARAD1C25102p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C25102g PE=3 SV=1 |
| UniRef50_G0V857 | 61.84% | 207 | 7e-80 | Uncharacterized protein n=23 Tax=Saccharomycetales TaxID=4892 RepID=G0V857_NAUCC |
| A0A167F198_9ASCO | 67.20% | 186 | 1e-82 | Mitochondrial 54S ribosomal protein YmL47 OS=Sugiyamaella lignohabitans GN=MRPL16 PE=3 SV=1 |
| RM16_YEAST | 63.96% | 197 | 2e-82 | 54S ribosomal protein L16, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL16 PE=1 SV=1 |
| A0A1E3PDT8_9ASCO | 65.05% | 186 | 1e-76 | Phenylalanyl-tRNA synthetase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53230 PE=4 SV=1 |
| A0A1D8PG94_CANAL | 55.90% | 195 | 9e-73 | Mitochondrial 54S ribosomal protein YmL47 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2019 PE=3 SV=1 |
| Q6CBJ9_YARLI | 41.78% | 213 | 3e-48 | YALI0C18139p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C18139g PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1548
Predicted cleavage: 25
Protein family membership
- Ribosomal protein L16 (IPR000114)
Domains and repeats
-
Domain
1
50
100
150
200
269
Detailed signature matches
no IPR
Unintegrated signatures
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CYTOPLASMIC_D... (C...)
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NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
Residue annotation
-
23S rRNA interface...
-
5S rRNA interface ...
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putative antibioti...
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L25 interface cd01...
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L27 interface cd01...
Protein sequence
>MCA_05698_1 MKISEIFSPPIFFILKISSIKLREDTSQQLLKVTSLFIIIIGIKYFGVMFQAKNVLSLFRNSFQKVFQQPAVITPARFKH EYAPRFVRVSKKHKGRVPVRTGGSIKGSTLQFGQFGLRLKTNGVRLAAIQLKEADNMLMRVMRANGCKLIRRLQTNIAVC VKGNETRMGKGKGPFDHWAVRVPTGKILFEINGPNLHEKVARDAFRIAADKLPGVYEVVTLKDKPKAGFTKVEIPEKVNI VEQMKQNPNKKVANMLKSKETFYQTFKGR
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Cellular Component
GO:0005622 intracellular
GO:0005840 ribosome