Protein

MCA_05271_1

Length
142 amino acids

Browser: contigD:822317-822887-

RNA-seq: read pairs 476, FPKM 41.1, percentile rank 60.8% (100% = highest expression)

Protein function

KEGG:K12592C1D exosome complex protein LRP1
EGGNOG:0PR5Texosome-associated family
CGD closest match:CAL0000186441orf19.5067Uncharacterized protein

Protein alignments

%idAln lengthE-value
MIA_01986_154.17%1204e-32MIA_01986_1
A0A0J9X908_GEOCN38.56%1538e-28Similar to Saccharomyces cerevisiae YHR081W LRP1 Nuclear exosome-associated nucleic acid binding protein OS=Geotrichum candidum GN=BN980_GECA04s07204g PE=4 SV=1
UniRef50_A0A0J9X90838.56%1532e-24Similar to Saccharomyces cerevisiae YHR081W LRP1 Nuclear exosome-associated nucleic acid binding protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X908_GEOCN
A0A1E3PTC6_9ASCO48.31%893e-19C1D-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81157 PE=4 SV=1
A0A060T3A7_BLAAD38.57%1403e-18ARAD1C39116p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C39116g PE=4 SV=1
Q6C2H9_YARLI35.78%1099e-16YALI0F07755p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F07755g PE=4 SV=1
A0A1D8PE95_CANAL49.06%531e-09Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5067 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0534

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR007146
    Sas10/Utp3/C1D
    1. PF04000 (Sas10_Utp3)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_05271_1
MENIPTVQKHVDNLEAQITNLSSLLEPLLLEDVDLMTPIQQADHYAVLSYALNSIIFAYLKSTGADPKTHPISVELSRIK
TYMQQISNAKNISTPSHTQRVDSEKAARFIKHALSNAGNAGSDSAPNKDPESFIKKVIESSK

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.