Protein
MCA_05235_2
Length
67 amino acids
Gene name: RPS28
Description: 40s ribosomal protein S28
Browser: contigD:704042-704651+
RNA-seq: read pairs 24439, FPKM 4440.7, percentile rank 99.4% (100% = highest expression)
Protein function
| Annotation: | RPS28 | 40s ribosomal protein S28 | |
|---|---|---|---|
| KEGG: | K02979 | RP-S28e | small subunit ribosomal protein S28e |
| EGGNOG: | 0PQTH | RPS28A | 40s ribosomal protein s28 |
| SGD closest match: | S000004254 | RPS28B | 40S ribosomal protein S28-B |
| CGD closest match: | CAL0000196464 | RPS28B | Ribosomal 40S subunit protein S28B |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| UniRef50_A0A1E4SHX5 | 93.94% | 66 | 3e-35 | Uncharacterized protein n=1 Tax=Candida tanzawaensis NRRL Y-17324 TaxID=984487 RepID=A0A1E4SHX5_9ASCO |
| A0A1D8PQN0_CANAL | 92.54% | 67 | 3e-39 | Ribosomal 40S subunit protein S28B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPS28B PE=3 SV=1 |
| A0A0J9XAM7_GEOCN | 91.04% | 67 | 1e-38 | Similar to Saccharomyces cerevisiae YLR264W RPS28B Protein component of the small (40S) ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA07s01341g PE=3 SV=1 |
| MIA_01959_1 | 91.04% | 67 | 2e-38 | MIA_01959_1 |
| A0A060TAJ2_BLAAD | 91.04% | 67 | 1e-38 | ARAD1D27478p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D27478g PE=3 SV=1 |
| RS28B_YEAST | 89.55% | 67 | 2e-37 | 40S ribosomal protein S28-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPS28B PE=1 SV=1 |
| A0A1E4TLS8_9ASCO | 85.07% | 67 | 4e-37 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_21669 PE=3 SV=1 |
| A0A1E3PCH4_9ASCO | 85.07% | 67 | 4e-36 | Ribosomal protein S28e OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48289 PE=3 SV=1 |
| Q6CCZ9_YARLI | 85.71% | 63 | 3e-34 | YALI0C05148p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C05148g PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7940
Predicted cleavage: 24
Protein family membership
- Ribosomal protein S28e (IPR000289)
Domains and repeats
-
Domain
1
10
20
30
40
50
60
67
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
RNA binding site c...
Protein sequence
>MCA_05235_2 MDTKTPVTLARVIKVLGRTGSRGGVTQVRVEFLDDATRTIVRNVKGPVREDDILCLMESEREARRLR
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
Cellular Component
GO:0005622 intracellular
GO:0005840 ribosome