Protein

MCA_05179_1

Length
324 amino acids

Description: protein with RNaseH-like domain

Browser: contigD:553152-554127-

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein function

Annotation:protein with RNaseH-like domain

Protein alignments

%idAln lengthE-value
UniRef50_A0A087SVE429.49%2952e-16Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087SVE4_9ARAC
A0A161HJI4_9ASCO23.99%2961e-12Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1
YCH4_YEAST26.54%2603e-10Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2
MIA_06017_125.68%2578e-09MIA_06017_1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.7266
Predicted cleavage: 19

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 324

Detailed signature matches

  1. Domain IPR012337
    Ribonuclease H-like domain
    1. G3DSA:3.30.42...
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF56672 (DNA/RNA p...)

Protein sequence

>MCA_05179_1
MAFYLYAQKLLSTKMRRSKSDMCVNVAGENTDSVCVSHVDDFLITSPDNKLIPSALGKTFQLKHHENPETYIGYELEYYD
TPLKKSIMYGSNSPFTVTFDDALSQAAPNLRSAKLSETQVDQKLYRSLVGVIQYVAAKTRFDVQFYGTNLSRFNHCPTPQ
MMNQAIQVMKFLYKTRHYSSYVFNRSKTKSNLLEIYTDASYNIRASDELTAKKHPPFGGYVILLNGNYVTSRSYSIRAAT
VSSVYEAELIAMHDGVKRGLALLPVLYDMCFKDVKINVYCDNKPLRKVVSFLKQIDYEAAFLNRVSYLRDKHGKNVFSVH
EVKG

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.