Protein
MCA_05103_1
Length
319 amino acids
Gene name: SWC5
Description: SWR1-complex protein 5
Browser: contigD:368232-369260-
RNA-seq: read pairs 1644, FPKM 63.5, percentile rank 70.5% (100% = highest expression)
Protein function
| Annotation: | SWC5 | SWR1-complex protein 5 | |
|---|---|---|---|
| EGGNOG: | 0PN3P | SWC5 | Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in chromosome stability |
| SGD closest match: | S000000435 | SWC5 | SWR1-complex protein 5 |
| CGD closest match: | CAL0000185200 | SWC5 | SWR1-complex protein 5 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04755_1 | 44.27% | 262 | 3e-51 | MIA_04755_1 |
| A0A0J9X7I3_GEOCN | 43.88% | 237 | 1e-39 | SWR1-complex protein 5 OS=Geotrichum candidum GN=BN980_GECA04s05576g PE=3 SV=1 |
| UniRef50_A0A0J9X7I3 | 43.88% | 237 | 2e-36 | SWR1-complex protein 5 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X7I3_GEOCN |
| A0A060T124_BLAAD | 38.80% | 250 | 5e-34 | SWR1-complex protein 5 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C13200g PE=3 SV=1 |
| A0A167FDQ6_9ASCO | 35.71% | 238 | 2e-31 | Swc5p OS=Sugiyamaella lignohabitans GN=SWC5 PE=4 SV=1 |
| SWC5_YEAST | 34.76% | 233 | 2e-21 | SWR1-complex protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWC5 PE=1 SV=1 |
| A0A1E3PLL5_9ASCO | 37.90% | 219 | 6e-21 | SWR1-complex protein 5 (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82183 PE=3 SV=1 |
| SWC5_CANAL | 47.06% | 68 | 5e-13 | SWR1-complex protein 5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWC5 PE=3 SV=2 |
| SWC5_YARLI | 60.38% | 53 | 1e-13 | SWR1-complex protein 5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SWC5 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0205
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
319
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_05103_1 MTTAIQEKPQNTVFIDEEDYRESEDEDYKEEENTLNQDDQSDSDDNDEYNDETNSKYEKKSLTKIAKDSKIAAESLRQQQ DNTSDEFDYSKYNDIQGEGLIKTRSQRRAESQSKIFNDVAQPVSDFDIDSIWESMNSSSSSSSSSISTPTTVDSSPSKTP SPVNEDFVVIKRVFNFAGKITHEQHTVPRSSAEAEAYLKEEALKKSKNKQQSPTVAIINDRNDPKNAKTYTTTTMKKKRQ NGPVKRKRSSLLEELNNFKAKKINTLEKSRIDWLGYVDKEGIKDELVLHNKDGFLEKQDFLSRVDRRVESELKFNSRKI
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.