Protein
MCA_05066_1
Length
775 amino acids
Gene name: DBP6
Description: ATP-dependent RNA helicase DBP6
Browser: contigD:277406-279734-
RNA-seq: read pairs 617, FPKM 9.8, percentile rank 25.7% (100% = highest expression)
Protein function
| Annotation: | DBP6 | ATP-dependent RNA helicase DBP6 | |
|---|---|---|---|
| KEGG: | K14807 | DDX51 | ATP-dependent RNA helicase DDX51/DBP6 [EC:3.6.4.13] |
| EGGNOG: | 0PIR2 | DBP6 | ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (By similarity) |
| SGD closest match: | S000005321 | DBP6 | ATP-dependent RNA helicase DBP6 |
| CGD closest match: | CAL0000190599 | DBP6 | ATP-dependent RNA helicase DBP6 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04785_1 | 57.10% | 718 | 0.0 | MIA_04785_1 |
| A0A0J9X9Z5_GEOCN | 41.63% | 687 | 7e-151 | Similar to Saccharomyces cerevisiae YNR038W DBP6 Essential protein involved in ribosome biogenesis OS=Geotrichum candidum GN=BN980_GECA06s03596g PE=3 SV=1 |
| UniRef50_A0A0J9X9Z5 | 41.63% | 687 | 1e-147 | Similar to Saccharomyces cerevisiae YNR038W DBP6 Essential protein involved in ribosome biogenesis n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9Z5_GEOCN |
| A0A161HIR3_9ASCO | 39.97% | 623 | 1e-117 | Dbp6p OS=Sugiyamaella lignohabitans GN=DBP6 PE=3 SV=1 |
| A0A1E3PPN0_9ASCO | 38.06% | 607 | 2e-105 | p-loop containing nucleoside triphosphate hydrolase protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_14658 PE=3 SV=1 |
| A0A060T2Q6_BLAAD | 38.25% | 604 | 1e-104 | ARAD1C30096p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C30096g PE=3 SV=1 |
| DBP6_CANAL | 40.57% | 456 | 3e-80 | ATP-dependent RNA helicase DBP6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP6 PE=3 SV=2 |
| DBP6_YARLI | 36.97% | 476 | 5e-80 | ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DBP6 PE=3 SV=1 |
| A0A1E4TL13_9ASCO | 37.12% | 458 | 1e-71 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_12107 PE=3 SV=1 |
| DBP6_YEAST | 33.98% | 465 | 1e-57 | ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DBP6 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1019
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
775
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
cd00079 (HELICc)
-
mobidb-lite (disord...)
Residue annotation
-
nucleotide binding...
-
ATP-binding site c...
Protein sequence
>MCA_05066_1 MTSTNIQEQSLKKRSINDTTEPNKTLTKKNKTDHEPVQPFQMPSYSDDSDDDSSDSSDDEEMKDLDKNNNLKYQNEPSIP EINLQQEEKVEDYKLDPKYAQFYARFQKAARQMALSTYNLTDEKDEFGNLKQATGMEPENDADKEIRQLIQQRENEAIPQ GLVPLPVPDLINSNDNDNNDDTPNISQLRKKMNLIPLDSSSTANSYSSKPIHISSSVTIPFDQIDGLLPSLKTSLIKDLK FTTAFAVQAALLPPLLDSINNDISPDPKPDILVNAATGSGKTLAYTIPIVQALSKRVVPQTRAVILLPTRPLITQIMHVF KTLAQNLDTSSSKLRIVALHGDHTLKSEQEKLTKNVPDIIVSTPGRLVDHIQLANISLKKLQYLVVDEADRLLGDSFNEW ASVLIKEIEVEESKPIVAQKNKLSSQTDSFSLSNLATFENMRFQKWYRPVQKMIFSATLTRDPGKLAMLRIRNPQVYIVG GSTDSDNTTTLENQQEQSESKEFNIPTTLKEVLVPIKSISVKPLRLLQLISFYQTKSPENNYNDSMKSHVLVFVNTNEAA ARLARLLTLLNDQVFHLNLKFQRCSGEQPAPVRRKVLKAFSETLQNDFKSSTNSNSNTEPIHVLICTDLVARGIDIAAVK NVINYDIPRGPREYVHRVGRTARAGQEGTAWSFATDRHEHGRFWRGIAAYIHREGKSTTTTTTKQHEQDEMEIDSFENVN NNNNDQHQKHEEEFESPIEKFLIEELVPQEGTREYQMIEEGYSKALALLGKEVQG
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
Cellular Component
None predicted.