Protein
MCA_05038_1
Length
350 amino acids
Browser: contigD:198133-199186-
RNA-seq: read pairs 55896, FPKM 1967.7, percentile rank 97.8% (100% = highest expression)
Protein function
| KEGG: | K02930 | RP-L4e | large subunit ribosomal protein L4e |
|---|---|---|---|
| EGGNOG: | 0PGJW | FG07186.1 | 60s ribosomal protein |
| SGD closest match: | S000000235 | RPL4A | 60S ribosomal protein L4-A |
| CGD closest match: | CAL0000176632 | RPL4B | Ribosomal 60S subunit protein L4B |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04834_1 | 88.00% | 350 | 0.0 | MIA_04834_1 |
| A0A0J9XAV2_GEOCN | 70.36% | 361 | 1e-171 | Similar to Saccharomyces cerevisiae YBR031W RPL4A N-terminally acetylated protein component of the large (60S) ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA08s01869g PE=4 SV=1 |
| A0A060T1U7_BLAAD | 71.07% | 363 | 2e-168 | ARAD1C23804p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C23804g PE=4 SV=1 |
| Q6CCT0_YARLI | 72.87% | 328 | 7e-166 | YALI0C06820p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C06820g PE=4 SV=1 |
| A0A1E3PCF2_9ASCO | 67.69% | 359 | 3e-165 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84587 PE=4 SV=1 |
| A0A167FFE1_9ASCO | 70.57% | 350 | 2e-161 | Ribosomal 60S subunit protein L4A OS=Sugiyamaella lignohabitans GN=RPL4A PE=4 SV=1 |
| A0A1D8PFV1_CANAL | 68.79% | 330 | 8e-155 | Ribosomal 60S subunit protein L4B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPL4B PE=4 SV=1 |
| UniRef50_A0A1D8PFV1 | 68.79% | 330 | 2e-151 | Ribosomal 60S subunit protein L4B n=17 Tax=saccharomyceta TaxID=716545 RepID=A0A1D8PFV1_CANAL |
| A0A1E4TBY9_9ASCO | 65.54% | 325 | 3e-144 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_134368 PE=4 SV=1 |
| RL4A_YEAST | 65.48% | 365 | 4e-143 | 60S ribosomal protein L4-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL4A PE=1 SV=4 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5586
Protein family membership
- Ribosomal protein L4/L1e (IPR002136)
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
350
Detailed signature matches
Protein sequence
>MCA_05038_1 MSRPQISVYSLSGSSATSNVVVPAVFKAPIRTDIVHSVWKGVAKNKRQAYAVASNAGEQTSAESWGTGRAVARIPRVGGG GTHRSGQAAFGNMCRGGRLFAPTKVWRKWNVKVNHNQKRYATASAIAASAVAPLVIARGHRAEKIPEVPLVVSSELETIT KTKEAIAALKAVGAGPDVARVIKSKNLRAGQGKLRGRRYTQRKGPLVVYAEDKGLVKAFKNVPGVETANVRSLSLLQLAP GSHVGRFIIWTESAIALLDDIWTSKSGFSLPKDLISNSDLKSILESSEIQAVLRPALNIKQYKIKKTNPLKNKDALLKLN PYAGVSKKPTKVAKKEVATSSVLVDILNQD
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
Cellular Component
GO:0005840 ribosome