Protein
MCA_05032_1
Length
1,895 amino acids
Gene name: RRP5
Description: rRNA biogenesis protein RRP5
Browser: contigD:180051-185879+
RNA-seq: read pairs 3362, FPKM 21.9, percentile rank 43.8% (100% = highest expression)
Protein function
| Annotation: | RRP5 | rRNA biogenesis protein RRP5 | |
|---|---|---|---|
| KEGG: | K14792 | RRP5 | rRNA biogenesis protein RRP5 |
| EGGNOG: | 0PG56 | RRP5 | rRNA biogenesis protein RRP5 |
| SGD closest match: | S000004842 | RRP5 | rRNA biogenesis protein RRP5 |
| CGD closest match: | CAL0000188474 | orf19.1578 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05434_1 | 61.03% | 1414 | 0.0 | MIA_05434_1 |
| A0A0J9X4Q2_GEOCN | 42.04% | 1389 | 0.0 | Similar to Saccharomyces cerevisiae YMR229C RRP5 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both 18S and 5.8S rRNAs OS=Geotrichum candidum GN=BN980_GECA01s11439g PE=4 SV=1 |
| UniRef50_A0A0J9X4Q2 | 42.04% | 1389 | 0.0 | Similar to Saccharomyces cerevisiae YMR229C RRP5 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both 18S and 5.8S rRNAs n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X4Q2_GEOCN |
| A0A1E3PIA8_9ASCO | 39.29% | 1382 | 0.0 | Nucleic acid-binding protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51740 PE=4 SV=1 |
| A0A060TDE1_BLAAD | 37.31% | 1383 | 0.0 | ARAD1D43010p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D43010g PE=4 SV=1 |
| A0A1E4TJ38_9ASCO | 34.00% | 1350 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30106 PE=4 SV=1 |
| A0A1D8PGR5_CANAL | 31.65% | 1390 | 0.0 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1578 PE=4 SV=1 |
| RRP5_YEAST | 29.18% | 1422 | 6e-164 | rRNA biogenesis protein RRP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP5 PE=1 SV=1 |
| A0A167C4U7_9ASCO | 34.73% | 763 | 5e-120 | Rrp5p OS=Sugiyamaella lignohabitans GN=RRP5 PE=4 SV=1 |
| Q6C430_YARLI | 27.93% | 1382 | 6e-107 | YALI0E30217p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E30217g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1374
Predicted cleavage: 11
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
200
400
600
800
1000
1200
1400
1600
1895
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
cd05693 (S1_Rrp5_re...)
-
mobidb-lite (disord...)
Residue annotation
-
RNA binding site c...
Protein sequence
>MCA_05032_1 MASSTKRKRSDSAFSAKPKESTGSAESRKSVLADDSSFPRGGGSVLTPIEIKQASNEAVQDVLFSNDAQSGETQRKKRKA SALDSKKSKVFGSSKVKAKSIESSGDKIKIESISYHSLAQGTRLLGQVVKITPLELVVSLPNSLIGHIPITRISKPISDI LQAADNQDSDNEDGSSPILPKLSQLFKVGQFLSTSVVSTTAPFSKGTAEKRHIELTIDPSQINSDINKADYVPGMAVQGY VSSVEDHGLIINLGVPSLELSAFISNNDLKQAFDVSIPPEPIVGQVLLLTVASVSSNGRTLTLTSNPLAQKVPLITSVES IKTVTAGVLVDATIKEVLPTGIVTTIYDHAIGTINLAHIPDHSTGLDIKDKDSKEKFIVGDRIKARVINTLPHIDPGYHV SLSILPHVLSLQSPFAKRKDDSVDAEDPLEAFPVGHIIDQAKVTQVDLNRGVFVDVQYKNLQGYVHISKISDKKPDALGP SIGPYRIGTVHKARVLDYCYLDNLYKITLQESALNIQFLNVSEITDGAITDVKVSKILPTGDIIVMLDGGIKGFVPSIYV SDVKLHFPEKKFKIGSKYKARVLFTDTLKNRIQATFKKTYVNSKDPIINSYDDKNVGVKTFATVTSIKKGGIIVEFFSHV RAFIPRGEISEAYIANPKDHFQLGQTVNVRITEVDSNEQRMTATCRTYQNASEKAVEAIKEIIPGKSVCSGTVVEKTSDS IILDIQPDDLRGILHYGHISDDTSLEKKKSLFKKVEVGQTLENLLVLEKNEKKQLVTVSAKPALLKTAKELGDSTGLPGD ITQVHTDQRLYGFISNVTESGVFVTFANKLTALAPKGELFNTNTFVSDPTQFFKKYSSVLCTVVKVDPESGRFNVSFKDS MANQLNDDGSEIKTDRPAVNPVDSSIKRLSDYKIGRLTKARVIVITPTHVNLEFADNQLGRIDISEVYDSFDEIENPLKP LEQFQDGQIISVRVIGTFNAKSAKALAITRPDAVTTVLECSCKPSLVNDSRKVIKLTPESEMDDSKILSKYTVGSVHTAF VHHLEDDLVFVNITPKMTGNVSVVDLSDQLEDVVNFKEKFPEGSALRVSVLKVNDPKKSKKEAVKNDSNDVKESINSNKW RNSLVLTTRVTAPLMNQVEESLVGMITPGEVIKKSTRKLIVRISGVLVATLHYTDIMDDYSMLSKKVESLEIGSIIPVKI IDVDTSNNKVFVSSRTSLVNPDSKKNVINKFVGSFADLEPKQKVEGFVSNISDHGVFVELGHSVVARVQIKNVSDDFLAD WKKGLKVGQKVSGVILSVNLAKKKADLSLKKSHLAGEGLDTVTGLSFSEIKVGSIMEGKVKKIFNYGVFISLKGTNNIDG LCHISEIADTPVEDIERLFDIGDKVKVKILDKDEKKKKLSLGLKASYFNEEDSDEDDENEDSNDINMVDSGNDEEGDDND DDDDEEEEEENFITVKSDFKEDESSESEDEDIDPASVQGLALGSGLSVGFDWTGSILEQDEKASDASDSEAASENEEDHE LRSKSKRRKNRTKINLEDKTAELATSAPQSVTDYERLLVANPNSSVVWMGFMAFQLQLGELDKAREIAERALKTISFRHE EEKLNIWVALLNLETNFGTPESVQKTFKESLQFMDSKTIYLKMASIYQAAGNIAAASKTFDECCKKFAREDLSLWAAYGE MLYKEASEEHNKTHHTETERAKFLEQARAVLEKAQKVATQLIKDKFLTAKRAYADLVAKFIKFEYQYGEIERGRNLFENL LSTYKKRIDLWAVFIDYEVKYNVDRFVKKHSSNSKEYKIKLQQNKKVVEDLFERLVGNKKTEVRISMKQAKFFFKKWLAF ETKYGDSKSVDYVKGKAGEYVAAHAPKKVEESDDDEDEEEEDDESSEEDDEIDLD
GO term prediction
Biological Process
GO:0006396 RNA processing
Molecular Function
GO:0003676 nucleic acid binding
GO:0005515 protein binding
Cellular Component
None predicted.