Protein

MCA_04682_1

Length
1,036 amino acids


Gene name: GCV2

Description: Glycine dehydrogenase (decarboxylating), mitochondrial

Browser: contigC:3715233-3718344-

RNA-seq: read pairs 1074, FPKM 12.8, percentile rank 30.6% (100% = highest expression)

Protein function

Annotation:GCV2Glycine dehydrogenase (decarboxylating), mitochondrial
KEGG:K00281GLDC glycine dehydrogenase [EC:1.4.4.2]
EGGNOG:0PGZAGCV2glycine dehydrogenase
SGD closest match:S000004801GCV2Glycine dehydrogenase (decarboxylating), mitochondrial
CGD closest match:CAL0000198461GCV2Glycine cleavage system P protein

Protein alignments

%idAln lengthE-value
MIA_03894_179.67%9690.0MIA_03894_1
A0A0J9X2V5_GEOCN72.57%9660.0Glycine cleavage system P protein OS=Geotrichum candidum GN=BN980_GECA01s10845g PE=3 SV=1
A0A1E3PGI4_9ASCO69.14%9560.0Glycine cleavage system P protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_26772 PE=3 SV=1
A0A167C0F7_9ASCO67.36%9680.0Glycine cleavage system P protein OS=Sugiyamaella lignohabitans GN=GCV2 PE=3 SV=1
A0A060T2A4_BLAAD67.47%9590.0Glycine cleavage system P protein OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A06710g PE=3 SV=1
Q6CHE0_YARLI66.09%9760.0Glycine cleavage system P protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A09856g PE=3 SV=1
A0A1E4TJZ4_9ASCO63.04%9660.0Glycine cleavage system P protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_675 PE=3 SV=1
UniRef50_Q0978558.90%10000.0Putative glycine dehydrogenase (decarboxylating), mitochondrial n=109 Tax=cellular organisms TaxID=131567 RepID=GCSP_SCHPO
GCSP_YEAST59.84%9810.0Glycine dehydrogenase (decarboxylating), mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCV2 PE=1 SV=1
A0A1D8PE97_CANAL59.04%9790.0Glycine cleavage system P protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GCV2 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.9920
Predicted cleavage: 62

Protein family membership

Domains and repeats

Detailed signature matches

    1. PF02347 (GDC-P)
    2. cd00613 (GDC-P)
    1. MF_00711 (GcvP)
    1. SSF53383 (PLP-depen...)
Unintegrated signatures no IPR
Unintegrated signatures

Residue annotation

  1. tetramer interface...
  2. pyridoxal 5'-phosp...
  3. catalytic residue ...
  4. tetramer interface...
  5. pyridoxal 5'-phosp...
  6. catalytic residue ...

Protein sequence

>MCA_04682_1
MSGRSLLMASRISRLSRASILRSASPLAASSSTVTPFLHNASPALTSKIESRSFHISKASLLASPSSPLAPLDTFIRRHT
GTQGKDVQKMLETVGYKDMDSFIADVVPSDILFKRELDISPSTQNGGEGLAEHEATALLKSIASKNKIVKSFIGKGYFGT
ITPPVIQRNMLESPEWYTSYTPYQPEISQGRLESLINFQTVVSDLTGLPIANCSLLDEGTAAAEAVIMAFHHHKEKRKTF
YVDPNIYKQTLTVVESRAKLLGINLIVGLPPATSNPKEDYKDVLGAMIQYPAADGSISDWSKLSADLHEAGSLLTVASDL
LALTVLEAPASFGADIVFGNSQRFGVPFGYGGPHAAFFATSDHEMRKMPGRLIGKSKDRLGNPAYRLALQTREQHIRREK
ATSNICTAQALLANMAAMYAVYHGPKGLKDIALRVFTLTTALATGLKETEYTVSNETFFDTLTIKVPNADEILAKAVSEY
QINLAKVDDSTISVSLDETVSAEDMTKLFQLFGVKSSVEDVVASLDKSVDGKFVAVPSEFARKSDFLKHDVFNKYHTETE
LLRYMHNLQSKDISLANSMIPLGSCTMKLNATTEMIPITWPEFASIHPFSPLDQAKGYAELITDLEKDLANITGFDATSL
QPNSGAAGEYTGLRVIRAYLESIGQGHRNVCLIPVSAHGTNPASAAMAGMKVVAVKCTNKGELDLKDLVAKVEKHKDNLA
AAMITYPSTFGVFEPTFKKACEIIHEHGGQVYMDGANMNAQIGLTSPGDIGADVCHLNLHKTFCIPHGGGGPGVGPICVK
SHLQPFLPGHEVVPMSASTPKSIGSVSSAPWGSASILPISWTYIKLSGNKGLKTNTEMALLNANYIKAKLEPYYPILYTN
EKDKCAHEFILDVRPFKATTGVEAIDIAKRLQDYGFHAPTMSFPVPNTLMIEPTESESIAELDKFIEAMISIRKEIQEIE
DGKMPKTNNVLKNAPHSAYDVTISNDWNDRPYTREKAAFPLPYLKERKAWPAVARVDDTYGDLNLFCTCDPPSLEE

GO term prediction

Biological Process

GO:0006544 glycine metabolic process
GO:0006546 glycine catabolic process
GO:0055114 oxidation-reduction process

Molecular Function

GO:0003824 catalytic activity
GO:0004375 glycine dehydrogenase (decarboxylating) activity

Cellular Component

None predicted.