Protein
MCA_04525_1
Length
307 amino acids
Gene name: DST1
Description: Transcription elongation factor S-II
Browser: contigC:3279920-3280927+
RNA-seq: read pairs 1180, FPKM 47.3, percentile rank 64.2% (100% = highest expression)
Protein function
Annotation: | DST1 | Transcription elongation factor S-II | |
---|---|---|---|
KEGG: | K03145 | TFIIS | transcription elongation factor S-II |
EGGNOG: | 0PFX1 | DST1 | transcription elongation factor SII |
SGD closest match: | S000003011 | DST1 | Transcription elongation factor S-II |
CGD closest match: | CAL0000174383 | orf19.4537 | Uncharacterized protein |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
MIA_03405_1 | 69.04% | 323 | 3e-144 | MIA_03405_1 |
A0A0J9XGJ8_GEOCN | 59.16% | 311 | 7e-120 | Similar to Saccharomyces cerevisiae YGL043W DST1 General transcription elongation factor TFIIS OS=Geotrichum candidum GN=BN980_GECA16s01275g PE=4 SV=1 |
A0A060TJ04_BLAAD | 58.67% | 300 | 7e-107 | ARAD1D42856p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D42856g PE=4 SV=1 |
Q6C6I8_YARLI | 54.00% | 300 | 2e-97 | YALI0E09196p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E09196g PE=4 SV=1 |
UniRef50_Q6C6I8 | 54.00% | 300 | 4e-94 | YALI0E09196p n=6 Tax=Saccharomycetales TaxID=4892 RepID=Q6C6I8_YARLI |
A0A1E4TEF5_9ASCO | 48.00% | 300 | 7e-94 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1801 PE=4 SV=1 |
A0A1E3PEF7_9ASCO | 53.49% | 301 | 1e-90 | Transcription elongation factor OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52797 PE=4 SV=1 |
Q59T94_CANAL | 45.42% | 306 | 5e-80 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4537 PE=4 SV=1 |
A0A167CJP6_9ASCO | 63.54% | 181 | 9e-74 | Dst1p OS=Sugiyamaella lignohabitans GN=DST1 PE=4 SV=1 |
TFS2_YEAST | 38.51% | 309 | 9e-66 | Transcription elongation factor S-II OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DST1 PE=1 SV=4 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0404
Protein family membership
- Transcription elongation factor, IIS-type (IPR035100)
- Transcription elongation factor, TFIIS (IPR006289)
Domains and repeats
-
Domain
1
50
100
150
200
250
307
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
SSF57783 (Zinc beta...)
-
cd13749 (Zn-ribbon_...)
-
mobidb-lite (disord...)
Residue annotation
-
trimer interface c...
-
Zn binding site cd...
Protein sequence
>MCA_04525_1 MTSSVSPLDVNEIRSLMHDLEKASGSKERILSLLSVFEERVRPTEKLLRETKLGIAVNKYRSHEDKAVSDMVKKIIKKWK DQVSSQKAALKHKHHHASTTSTSTSNSSQNTTTASSNSNGSSSSASTNGKVRTAASDGAKTAIHDDKVRNSCLELLYNAL VIDSSVSTSEVLAVAKEVEEAVFVGEKGVTSGYRAKIRSLVSNLRDRKNPNLRKRVVSGEISGKKLYSMSPQEMASDEIK KDIEQFKKENLFNAQAAVQKNAVTDRFTCGKCKQKKVSYFQMQTRSADEPLTTFCTCENCGNRWKFS
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Cellular Component
GO:0005634 nucleus