Protein

MCA_04051_1

Length
281 amino acids

Gene name: UBC6

Description: Ubiquitin-conjugating enzyme E2 6

Browser: contigC:1878929-1879853+

RNA-seq: read pairs 1270, FPKM 55.6, percentile rank 67.7% (100% = highest expression)

Protein function

Annotation:UBC6Ubiquitin-conjugating enzyme E2 6
KEGG:K04554UBE2J2 ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23]
EGGNOG:0PGC6UBC6ubiquitin-conjugating enzyme
SGD closest match:S000000902UBC6Ubiquitin-conjugating enzyme E2 6
CGD closest match:CAL0000184069orf19.7347E2 ubiquitin-conjugating protein

Protein alignments

%idAln lengthE-value
MIA_02213_172.05%1616e-85MIA_02213_1
UniRef50_C5DE6769.46%1679e-80KLTH0C06688p n=12 Tax=Ascomycota TaxID=4890 RepID=C5DE67_LACTC
A0A0J9XKZ6_GEOCN68.52%1621e-80Similar to Saccharomyces cerevisiae YER100W UBC6 Ubiquitin-conjugating enzyme involved in ER-associated protein degradation OS=Geotrichum candidum GN=BN980_GECA25s00670g PE=3 SV=1
UBC6_YEAST62.71%1771e-77Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBC6 PE=1 SV=1
A0A1E3PIA9_9ASCO65.22%1618e-75UBC-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83217 PE=3 SV=1
Q6C431_YARLI66.88%1545e-73YALI0E30173p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E30173g PE=3 SV=2
A0A060TIX1_BLAAD60.12%1682e-70ARAD1D41844p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D41844g PE=3 SV=1
A0A1E4TH10_9ASCO64.74%1562e-70Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_13864 PE=3 SV=1
A0A1D8PKG7_CANAL60.62%1604e-61E2 ubiquitin-conjugating protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7347 PE=3 SV=1
A0A167C594_9ASCO59.55%897e-32E2 ubiquitin-conjugating protein UBC6 OS=Sugiyamaella lignohabitans GN=UBC6 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0988

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 281

Detailed signature matches

  1. Domain IPR016135
    Ubiquitin-conjugating enzyme/RWD-like
    1. SSF54495 (UBC-like)
    2. G3DSA:3.10.11...
  2. Domain IPR000608
    Ubiquitin-conjugating enzyme E2
    1. PS50127 (UBIQUITIN_...)
    2. cd00195 (UBCc)
    3. PF00179 (UQ_con)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. SM00212 (ubc_7)
  4. TMhelix
  5. TRANSMEMBRANE (Tran...)
  6. mobidb-lite (disord...)

Residue annotation

  1. E3 interaction res...
  2. Ub thioester inter...
  3. active site cystei...

Protein sequence

>MCA_04051_1
MASKTAYKRLTKEYKDIQANAVPYVIAKPNEANILEWHYVITGPPDTPYEGGQYHGTLTFPSEYPFKPPAIRMHTPTGRF
QPDMRLCLSISDYHPKSWNPAWSVNTILTGLVSFMVSDEITAGSITTDIKTKEKFNKQSRLYNATRNKAFKEQFPELVKE
NIQWAKEKLNITNLDSATLSSAQGSTTNNNNNNNNTNNANNVLIKNIEPQQQGRRNLVNVNLDNANNKAFDNKTKEEETS
SNNNNNNKKKNSKIGMSNIQKVVCVAVIFVSWIVASKMVSS

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.