Protein
MCA_03273_1
Length
183 amino acids
Gene name: TMA20
Description: Translation machinery-associated protein 20
Browser: contigB:3883112-3883821-
RNA-seq: read pairs 2531, FPKM 170.0, percentile rank 86.3% (100% = highest expression)
Protein function
| Annotation: | TMA20 | Translation machinery-associated protein 20 | |
|---|---|---|---|
| KEGG: | K07575 | PUA domain protein | |
| EGGNOG: | 0PGCQ | TMA20 | Translation machinery-associated protein |
| SGD closest match: | S000002957 | TMA20 | Translation machinery-associated protein 20 |
| CGD closest match: | CAL0000194613 | orf19.2920 | Translation machinery-associated protein 20 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05659_1 | 76.50% | 183 | 7e-104 | MIA_05659_1 |
| A0A0J9XGU9_GEOCN | 70.49% | 183 | 1e-99 | Translation machinery-associated protein 20 OS=Geotrichum candidum GN=BN980_GECA16s00758g PE=3 SV=1 |
| A0A060T5G1_BLAAD | 70.17% | 181 | 4e-94 | Translation machinery-associated protein 20 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C11924g PE=3 SV=1 |
| A0A1E3PMD1_9ASCO | 61.33% | 181 | 7e-83 | Translation machinery-associated protein 20 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_73694 PE=3 SV=1 |
| UniRef50_W1QAG5 | 62.98% | 181 | 4e-79 | Translation machinery-associated protein 20 n=7 Tax=Eukaryota TaxID=2759 RepID=W1QAG5_OGAPD |
| Q6CGQ0_YARLI | 60.11% | 178 | 1e-79 | YALI0A17380p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A17380g PE=4 SV=1 |
| Q5A199_CANAL | 63.24% | 185 | 3e-78 | Translation machinery-associated protein 20 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2920 PE=3 SV=1 |
| TMA20_YEAST | 58.19% | 177 | 8e-73 | Translation machinery-associated protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TMA20 PE=1 SV=1 |
| A0A1E4TG68_9ASCO | 66.99% | 103 | 2e-42 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_57186 PE=4 SV=1 |
| A0A161HKH6_9ASCO | 69.70% | 66 | 3e-28 | Tma20p OS=Sugiyamaella lignohabitans GN=TMA20 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7500
Protein family membership
- MCT-1/Tma20 (IPR016437)
Domains and repeats
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Domain
1
20
40
60
80
100
120
140
160
183
Detailed signature matches
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PIRSF005067 (Tma_RN...)
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-
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SSF88697 (PUA domai...)
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no IPR
Unintegrated signatures
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cd11609 (MCT1_N)
Residue annotation
-
PUA domain interfa...
Protein sequence
>MCA_03273_1 MFKKFSREDVGSRSNIKSSVQRGLKSRVAEQFPGFEPVADEIVPKKSQLTQIKCADRITLYTVGSDLVFLQSESTDTVPT LNLVHRYPSILPSVRVDRGAIKFILGGANIMCPGLTSKGAQLPEDVEYEKDQIVAVYAEGKEHALAIGKLVMSTQDIKNI NKGIAIELITYLGDGLWALKDSI
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003723 RNA binding
Cellular Component
None predicted.