Protein
MCA_03193_1
Length
812 amino acids
Browser: contigB:3611726-3614165-
RNA-seq: read pairs 171, FPKM 2.6, percentile rank 13.0% (100% = highest expression)
Protein function
| EGGNOG: | 0PFHS | PGUG_05398 | Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity) |
|---|---|---|---|
| SGD closest match: | S000000193 | BRN1 | Condensin complex subunit 2 |
| CGD closest match: | CAL0000196556 | BRN1 | Condensin complex subunit 2 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| UniRef50_I4YAQ3 | 28.78% | 205 | 2e-12 | Condensin complex subunit 2 n=2 Tax=Wallemia TaxID=148959 RepID=I4YAQ3_WALMC |
| MIA_03125_1 | 25.62% | 203 | 3e-14 | MIA_03125_1 |
| A0A1E3PCR0_9ASCO | 27.06% | 218 | 3e-14 | Barren-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53441 PE=4 SV=1 |
| A0A167E8B0_9ASCO | 31.85% | 135 | 9e-13 | Condensin complex subunit 2 OS=Sugiyamaella lignohabitans GN=BRN1 PE=3 SV=1 |
| A0A060T814_BLAAD | 28.42% | 190 | 9e-13 | Condensin complex subunit 2 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C32736g PE=3 SV=1 |
| A0A0J9XBR9_GEOCN | 34.27% | 143 | 3e-11 | Condensin complex subunit 2 OS=Geotrichum candidum GN=BN980_GECA09s02023g PE=3 SV=1 |
| CND2_YEAST | 26.94% | 219 | 3e-09 | Condensin complex subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BRN1 PE=1 SV=3 |
| Q6CFV1_YARLI | 24.15% | 207 | 3e-09 | Condensin complex subunit 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B03476g PE=3 SV=1 |
| A0A1D8PMC8_CANAL | 25.89% | 197 | 1e-07 | Condensin complex subunit 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BRN1 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0073
Protein family membership
- Condensin complex subunit 2/barren (IPR022816)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_03193_1 MSNNNNFQSNLSDWDSFTAQVNLLNSKRANVWDFDIIDRLYALNLLRKDININNTNGSNNAHTRNFSRQRSSVVTFSDID FYKAAYAVEHCAKLYSARVDLCSTDLNKVLSNLNASLLESRIESIDKENNNNNNNSDVEMIYDEENVNNNRSKQNRTKSL AKNFGQIQCRALDLELTGDSFFTKTVKNFVDNSASGLLLNRLSIDWRGLKVVYGEENRMSENFAFPVSINNDNNNNMVVA PTTIFAENFKFKTTGKTDEIRFDTSSLWTSYFDKISKERNSKRKQKRSSASSILDDFVTLIPSLDKLEKHIEVQVTTRKN LANWFGEPQEDEEQDYDYDGTFEIGSGFDDDDDVILVDNDHETEPMVLDDNNNDNDNNVELMLNEDPDPVHNIQDILDNE NINNYFDNQTDGLQSAQLFPASSSSSQHFRRNTSETERREVLTLSFSSTPLEQVPNIYDDDDDDSDEDYQEPQLPRINNN NITLSVKDKERYKNLSSTLTIVPRNAFDFYFKKQMTFLFSKRVAPKVLPPSTKPGNSFYYLNICDPLLQLSVDSVHKTTV TVPFPQYFLVQRQPDPCFSSSSSSDSNDGSLNIFDFENDDDIYDDFVGSLNMNYDDYDHDHNNNHDDEDVGASSIINLRH RSTTIDDSATDILSSNNNKNSNIDDRFEYAKSHSQIDFKKAMVILKKCLLNIFSNLLEQSSRIIYIDIDSEEEEEKEEYN VLFSDLLLSTKKNIKTFGETDSTIIKKEHEDEFVKKEKEEDEQDYEEEEQRDEHSLAVNFVLLLTIATEEGLNLLSFQDS NYTDIQISKYFN
GO term prediction
Biological Process
GO:0007076 mitotic chromosome condensation
Molecular Function
None predicted.
Cellular Component
GO:0000796 condensin complex