Protein
MCA_02770_1
Length
513 amino acids
Gene name: TAF6
Description: Transcription initiation factor TFIID subunit 6
Browser: contigB:2323316-2324858+
RNA-seq: read pairs 2695, FPKM 64.8, percentile rank 70.8% (100% = highest expression)
Protein function
| Annotation: | TAF6 | Transcription initiation factor TFIID subunit 6 | |
|---|---|---|---|
| KEGG: | K03131 | TAF6 | transcription initiation factor TFIID subunit 6 |
| EGGNOG: | 0PI43 | PGUG_01300 | Transcription initiation factor TFIID |
| SGD closest match: | S000003080 | TAF6 | Transcription initiation factor TFIID subunit 6 |
| CGD closest match: | CAL0000197010 | TAF60 | Taf60p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00240_1 | 71.32% | 516 | 0.0 | MIA_00240_1 |
| A0A0J9XD50_GEOCN | 64.65% | 512 | 0.0 | Similar to Saccharomyces cerevisiae YGL112C TAF6 Subunit (60 kDa) of TFIID and SAGA complexes OS=Geotrichum candidum GN=BN980_GECA11s01319g PE=4 SV=1 |
| A0A167DMW1_9ASCO | 55.73% | 506 | 0.0 | Taf6p OS=Sugiyamaella lignohabitans GN=TAF6 PE=4 SV=1 |
| UniRef50_A0A167DMW1 | 55.73% | 506 | 0.0 | Taf6p n=6 Tax=Saccharomycetales TaxID=4892 RepID=A0A167DMW1_9ASCO |
| A0A060T286_BLAAD | 53.82% | 511 | 0.0 | ARAD1C23364p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C23364g PE=4 SV=1 |
| A0A1E3PTC0_9ASCO | 53.74% | 508 | 0.0 | DUF1546-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45153 PE=4 SV=1 |
| Q6CCZ2_YARLI | 50.68% | 517 | 6e-171 | YALI0C05346p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C05346g PE=4 SV=1 |
| A0A1D8PKJ2_CANAL | 42.11% | 551 | 8e-150 | Taf60p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TAF60 PE=4 SV=1 |
| TAF6_YEAST | 40.43% | 559 | 1e-128 | Transcription initiation factor TFIID subunit 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF6 PE=1 SV=1 |
| A0A1E4TBW2_9ASCO | 43.07% | 462 | 3e-129 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_58223 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1092
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
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350
400
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513
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd08050 (TAF6)
-
mobidb-lite (disord...)
Protein sequence
>MCA_02770_1 MATSNAASSIKYSHTLWSPSDTIRDVAEVLGISNLPDEVSKSLAMEVEYRIHEVVEEAVKFMRHSRRTTLTTKDISNALR VMNVEPLYGYDTTRPLIYKEAMVGPGQTLYYVDDDDVDFEKIINQPLPKVPRATSFTAHWLAIEGVQPTIPQNPLPSEVA MIPPSVRGSQVTHSVSALASDVEVKPLVKHVISKELQIYFDKVVEALLQSAKDESNAEETEDGATTATANGTSNGGGASL RSIALNSLRNDPGLHQLVPYLVQFVQEQISQHLKSNLNIVNTMLEVIYAMLQNPNIFIEPYIHQIMPCLLTPLLSKRVGP ESSPSSTTPIDTDTVITNNDVDGEPTDGTSSKVIDTNTYAIRDFAASLISRISEKYSDIYYSLKPRVTRTLLKGFMDVNR TVPSWYGSIAGIKGLGPEVVRVVIVGNLKAWYHGVLPRITDTQEQLVLTNAIIDALRKLKADLPDLYLLEEQQEHDILTP EDEQKVKQLVGEKFFEALQKEKDGNLIAKALIL
GO term prediction
Biological Process
GO:0006352 DNA-templated transcription, initiation
GO:0051090 regulation of sequence-specific DNA binding transcription factor activity
Molecular Function
GO:0005488 binding
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0005634 nucleus