Protein
MCA_01797_1
Length
197 amino acids
Gene name: RPC25
Description: DNA-directed RNA polymerase III subunit RPC8
Browser: contigA:5482989-5483830+
RNA-seq: read pairs 1043, FPKM 65.1, percentile rank 70.9% (100% = highest expression)
Protein function
| Annotation: | RPC25 | DNA-directed RNA polymerase III subunit RPC8 | |
|---|---|---|---|
| KEGG: | K03022 | RPC8 | DNA-directed RNA polymerase III subunit RPC8 |
| EGGNOG: | 0PNFC | RPC25 | DNA-directed RNA polymerase III |
| SGD closest match: | S000001627 | RPC25 | DNA-directed RNA polymerase III subunit RPC8 |
| CGD closest match: | CAL0000199486 | orf19.443 | DNA-directed RNA polymerase III subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02389_1 | 78.00% | 200 | 2e-117 | MIA_02389_1 |
| A0A0J9XGA0_GEOCN | 73.60% | 197 | 1e-108 | Similar to Saccharomyces cerevisiae YKL144C RPC25 RNA polymerase III subunit C25 OS=Geotrichum candidum GN=BN980_GECA15s01088g PE=4 SV=1 |
| A0A060TCC8_BLAAD | 63.05% | 203 | 1e-94 | ARAD1D35266p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D35266g PE=4 SV=1 |
| A0A1E3PMM4_9ASCO | 60.70% | 201 | 2e-89 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45986 PE=4 SV=1 |
| A0A1E4TEG9_9ASCO | 56.85% | 197 | 1e-83 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_101697 PE=4 SV=1 |
| UniRef50_A0A1E3QU97 | 50.51% | 198 | 1e-71 | Uncharacterized protein n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E3QU97_9ASCO |
| Q6C9G5_YARLI | 53.96% | 202 | 2e-75 | YALI0D11396p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D11396g PE=4 SV=1 |
| Q5A298_CANAL | 52.79% | 197 | 6e-72 | DNA-directed RNA polymerase III subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.443 PE=4 SV=1 |
| RPC8_YEAST | 46.23% | 212 | 7e-68 | DNA-directed RNA polymerase III subunit RPC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPC25 PE=1 SV=1 |
| A0A167E815_9ASCO | 74.19% | 124 | 7e-65 | DNA-directed RNA polymerase III subunit RPC25 OS=Sugiyamaella lignohabitans GN=RPC25 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0862
Protein family membership
- DNA-directed RNA polymerase, subunit E/RPC8 (IPR004519)
Domains and repeats
-
Domain
-
Domain
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Domain
1
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40
60
80
100
120
140
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180
197
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd04330 (RNAP_III_R...)
Residue annotation
-
Rpc17 interaction ...
Protein sequence
>MCA_01797_1 MFVLSKISDLIRIEPPSFGVPLAESLEDEINKKYSNRIIYNVGLCICLYDVEHFEDGMTKNGDGGVFIKCTFRLIVFRPF VGEILVGWVSSCTEDGINVKMEFFDDIYIPKDLLFESCVFIPREQAWVWKNGDYEFYIDTNEKIRFRMEQEIFTQQQPRK PSGIAVEDEQAAINQPPPYRIVGSCQTDGMGLVSWWD
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
Cellular Component
None predicted.