Protein

MCA_01780_1

Length
60 amino acids

Description: protein with ribosomal L9/ ribonuclease H1 domain

Browser: contigA:5441938-5442121+

RNA-seq: read pairs 35, FPKM 7.1, percentile rank 20.7% (100% = highest expression)

Protein function

Annotation:protein with ribosomal L9/ ribonuclease H1 domain
CGD closest match:CAL0000191701RNH1Rnh1p

Protein alignments

%idAln lengthE-value
UniRef50_F0TI0048.84%432e-06Ribonuclease HI n=1 Tax=Lactobacillus amylovorus TaxID=1604 RepID=F0TI00_LACAM
Q6CH42_YARLI42.55%473e-07YALI0A12705p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A12705g PE=4 SV=1
A0A0J9X3A6_GEOCN42.31%521e-06Ribonuclease H OS=Geotrichum candidum GN=BN980_GECA01s10097g PE=3 SV=1
A0A161HJH2_9ASCO50.00%341e-06Ribonuclease H OS=Sugiyamaella lignohabitans GN=RNH1 PE=3 SV=1
MIA_01559_140.91%442e-06MIA_01559_1
Q5ABY8_CANAL43.18%443e-06Rnh1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNH1 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.7259
Predicted cleavage: 17

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 10 20 30 40 50 60 60

Detailed signature matches

  1. Domain IPR009027
    Ribosomal protein L9/RNase H1, N-terminal
    1. SSF55658 (L9 N-doma...)
  2. Domain IPR011320
    Ribonuclease H1, N-terminal
    1. PF01693 (Cauli_VI)
    2. G3DSA:3.40.97...

Protein sequence

>MCA_01780_1
MDAPKKSYYAVRNGRTQGIYDNHVQARKHTDGYSGNEMKKFNNINKACEYVCKSDNGKKK

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.