Protein
MCA_01763_1
Length
452 amino acids
Gene name: DBP8
Description: ATP-dependent RNA helicase DBP8
Browser: contigA:5400437-5401864-
RNA-seq: read pairs 2051, FPKM 55.9, percentile rank 67.9% (100% = highest expression)
Protein function
| Annotation: | DBP8 | ATP-dependent RNA helicase DBP8 | |
|---|---|---|---|
| KEGG: | K14778 | DDX49 | ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13] |
| EGGNOG: | 0PFQM | DBP8 | ATP-binding RNA helicase involved in 40S ribosomal subunit biogenesis and is required for the normal formation of 18S rRNAs through pre-rRNA processing at A0, A1 and A2 sites. Required for vegetative growth (By similarity) |
| SGD closest match: | S000001212 | DBP8 | ATP-dependent RNA helicase DBP8 |
| CGD closest match: | CAL0000181153 | DBP8 | ATP-dependent RNA helicase DBP8 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04587_1 | 75.67% | 411 | 0.0 | MIA_04587_1 |
| A0A167D409_9ASCO | 63.35% | 412 | 0.0 | ATP-dependent RNA helicase DBP8 OS=Sugiyamaella lignohabitans GN=DBP8 PE=3 SV=1 |
| A0A0J9XDI4_GEOCN | 62.86% | 412 | 0.0 | Similar to Saccharomyces cerevisiae YHR169W DBP8 ATPase OS=Geotrichum candidum GN=BN980_GECA10s03409g PE=3 SV=1 |
| A0A060T3I4_BLAAD | 62.71% | 413 | 0.0 | ARAD1A15796p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A15796g PE=3 SV=1 |
| UniRef50_A0A1E4S7G4 | 61.46% | 410 | 0.0 | DEAD-domain-containing protein n=1 Tax=Cyberlindnera jadinii NRRL Y-1542 TaxID=983966 RepID=A0A1E4S7G4_CYBJA |
| A0A1E3PMK0_9ASCO | 62.20% | 410 | 0.0 | ATP-dependent RNA helicase DBP8 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50464 PE=3 SV=1 |
| DBP8_YARLI | 60.58% | 411 | 0.0 | ATP-dependent RNA helicase DBP8 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DBP8 PE=3 SV=1 |
| DBP8_CANAL | 58.50% | 412 | 0.0 | ATP-dependent RNA helicase DBP8 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP8 PE=3 SV=1 |
| DBP8_YEAST | 55.61% | 410 | 2e-174 | ATP-dependent RNA helicase DBP8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DBP8 PE=1 SV=1 |
| A0A1E4TMH7_9ASCO | 56.49% | 416 | 8e-169 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_21508 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1296
Predicted cleavage: 19
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
350
400
452
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd00079 (HELICc)
-
mobidb-lite (disord...)
Residue annotation
-
nucleotide binding...
-
ATP-binding site c...
Protein sequence
>MCA_01763_1 MSFKSLGLPPWMVDNLRKVSINTPSAIQQACIPAILEGRDCIGGAKTGSGKTIAFAAPMIVQWAKDPYAICGIVLTPTRE LAIQIADQFQAIGSSANIKVCVVIGGMDMTRQSQALKERPHFVIATPGRLADEILSNGEEIIPALKRAKFLVLDEADRLL SQSMSADLNTCLSVLAPPEKRQTLLFTATVTESVLAIKDQSPKPGKKPVFIQEISSDEIVIPDTLSQTYIFIPSYVREAY LYSIITHEDNEHKSTIVFVNRTSTAEMLRRTLEKLDVKVVSLHSEMPQRDRINSLTKFRLETARVLVATDVAGRGLDIPA VEMVINYEIPANPQDYVHRVGRTARAGRHGESISLVSEQDVNLIHKIEETVGSRLEEYTKITEDDVLNKTLTPVSIAKRE SIMDMDRDNFGEQRKIREKKRRQRDMNSKPVKSQDKAGIRKKKSSHKKKHSE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
Cellular Component
None predicted.