Protein
MCA_01393_1
Length
275 amino acids
Gene name: MRP20
Description: 54S ribosomal protein L41, mitochondrial
Browser: contigA:4349679-4350507+
RNA-seq: read pairs 4264, FPKM 190.9, percentile rank 87.6% (100% = highest expression)
Protein function
| Annotation: | MRP20 | 54S ribosomal protein L41, mitochondrial | |
|---|---|---|---|
| KEGG: | K02892 | RP-L23 | large subunit ribosomal protein L23 |
| EGGNOG: | 0PRXZ | PGUG_02834 | mitochondrial 54S ribosomal protein YmL41 |
| SGD closest match: | S000002813 | MRP20 | 54S ribosomal protein L41, mitochondrial |
| CGD closest match: | CAL0000174219 | MRP20 | Mitochondrial 54S ribosomal protein YmL41 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03183_1 | 63.04% | 276 | 5e-101 | MIA_03183_1 |
| A0A0J9X2U0_GEOCN | 54.32% | 278 | 3e-84 | Similar to Saccharomyces cerevisiae YDR405W MRP20 Mitochondrial ribosomal protein of the large subunit OS=Geotrichum candidum GN=BN980_GECA01s05444g PE=4 SV=1 |
| UniRef50_A0A0J9X2U0 | 54.32% | 278 | 7e-81 | Similar to Saccharomyces cerevisiae YDR405W MRP20 Mitochondrial ribosomal protein of the large subunit n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9X2U0_GEOCN |
| A0A167EB71_9ASCO | 47.83% | 276 | 5e-71 | Mitochondrial 54S ribosomal protein YmL41 OS=Sugiyamaella lignohabitans GN=MRP20 PE=4 SV=1 |
| A0A060TFC0_BLAAD | 50.22% | 231 | 2e-67 | ARAD1D14300p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D14300g PE=4 SV=1 |
| A0A1E3PFD4_9ASCO | 59.15% | 142 | 5e-53 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47839 PE=4 SV=1 |
| RM41_YEAST | 52.94% | 153 | 1e-50 | 54S ribosomal protein L41, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRP20 PE=1 SV=1 |
| A0A1D8PCJ1_CANAL | 55.37% | 121 | 7e-46 | Mitochondrial 54S ribosomal protein YmL41 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MRP20 PE=4 SV=1 |
| Q6C653_YARLI | 43.93% | 173 | 3e-42 | YALI0E12353p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E12353g PE=4 SV=1 |
| A0A1E4TC56_9ASCO | 51.52% | 99 | 2e-25 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3973 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9992
Predicted cleavage: 18
Protein family membership
- Ribosomal protein L25/L23 (IPR013025)
Domains and repeats
-
Domain
1
50
100
150
200
250
275
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01393_1 MARLLFRSAKRKAVARPPPVFIPKTSLLEQARLKEQAQTTDKKVKASAPPPPPKRTPVKFKQGELPTPRPNRATQNLERV RKAIENDEPHFRVGERQVYLPMAKVVLLRPNAKHTPYQAKFAVPKYFNKLDLRDYLYHVYGLRALNITTQLSFTRWTRDT IRSPRYRTTQIKKMTIDMIDPFVWPKQPSASEMAKMLNLELRLELEKYIDDSRRLGSDKNKEPTSFGGILGPFPAPPQPF VPKYVKKNALRIKEKDARLAARAEDEALVKKYLNL
GO term prediction
Biological Process
GO:0006412 translation
Molecular Function
GO:0003735 structural constituent of ribosome
Cellular Component
GO:0005622 intracellular
GO:0005840 ribosome