Protein

MCA_01361_1

Length
923 amino acids

Description: Reverse transcriptase

Browser: contigA:4245835-4248607+

RNA-seq: read pairs 274, FPKM 3.7, percentile rank 15.1% (100% = highest expression)

Protein function

Annotation:Reverse transcriptase
EGGNOG:0QDZFReverse transcriptase (RNA-dependent DNA polymerase)

Protein alignments

%idAln lengthE-value
UniRef50_Q967L527.88%3739e-31Putative uncharacterized protein n=1 Tax=Aedes aegypti TaxID=7159 RepID=Q967L5_AEDAE
MIA_04857_124.79%3513e-28MIA_04857_1
A0A161HJI4_9ASCO23.68%3972e-22Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1
YCH4_YEAST25.64%3121e-14Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1453

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 923

Detailed signature matches

  1. Domain IPR013103
    Reverse transcriptase, RNA-dependent DNA polymerase
    1. PF07727 (RVT_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil

Protein sequence

>MCA_01361_1
MIDTLNNNEIYALISRADLESRFVSDILYEKQEDKRLGVPLISYQDSRKFIDSVTLALIKLDPKQVVLYFVTVGEWPPMM
QLVKDEINQNALSQLETYLFRFLDTYLRRFLVCSEARLNILDGTHSAPELYKQLCANFCDNGVKAVTEQLMQLEKISQNE
DVSTKSKNIVESVTELHRTIEFLSSESNISKESLKSFHYYTPKEILTQATEQSDIPCFQDPTLDNEFFSKASVIDYLLNT
SSQSGYLDSPLHVDKPEKDQFYTIINETSSKLDISEDDKRILSYAGLCLAIEKRDLYRTIATLQRQISLLEKGIIISHAK
SKKVFEDINETYKETESILKKAKKAALDISTENEEELKLLSSPFSGDHDFCCYEKNSHIFHYRRTLELCREFQDDHKVRK
ILLRSLYFWSDTLSHKERNLHPKGQYVARQIKSGAITPVKTYPQGTVLDCHFEKIESCFWKGPEFRLVVNGKDQIKGVDY
HKTDVPIPSHLLLRLFFALAQGLDHNISQFEFPDAIEQGDLEEEIYIELPYGSDIEYAKLNKCLSGLKQAKYCWTKKLNS
MLEKFGFKRSSVEKSFYILKDESHLTMLIVHFDNILVSSSDPQGLDRVRGMFMLDGKMYIRDLGFPKTFFGIDLVKMGGK
IGMSAKAQIEKLVLYYTDKSPPDLQNLLSNSNPSDLMFSEVLPYYRTLVKKLKQISKIWRPDITAEVSILDTNVFEDKPK
ENFDRLKKLIEHLSATISHQLVFSKPKDDIISPTGYVGTYVLPEKQHLSNFCRTGYILQVFDNPVLWLSQKEKETAYSNI
EGEFIACSTFLAHIKNFQILLKDELHLLENAPIEIALTNKRTVSYLNKRDEYEPEYLCSKTKYLDAITLLEQMGIEVIFS
HPSYTMASAFTQKLAYNSELSQTLKNLHVEEIKNSKHLVKLNN

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.