Protein

MCA_01140_1

Length
1,001 amino acids

Browser: contigA:3629002-3632008+

RNA-seq: read pairs 33, FPKM 0.4, percentile rank 6.4% (100% = highest expression)

Protein function

EGGNOG:0PJNCFG05203.1Pumilio-family RNA binding repeat
SGD closest match:S000003936PUF3mRNA-binding protein PUF3
CGD closest match:CAL0000187550PUF3mRNA-binding protein

Protein alignments

%idAln lengthE-value
MIA_00928_173.09%3013e-153MIA_00928_1
A0A167CDW0_9ASCO60.88%3171e-125mRNA-binding protein PUF3 OS=Sugiyamaella lignohabitans GN=PUF3 PE=4 SV=1
A0A0J9X7K4_GEOCN68.75%2721e-129Similar to Saccharomyces cerevisiae YLL013C PUF3 Protein of the mitochondrial outer surface OS=Geotrichum candidum GN=BN980_GECA04s04476g PE=4 SV=1
UniRef50_A0A0J9X7K468.75%2722e-126Similar to Saccharomyces cerevisiae YLL013C PUF3 Protein of the mitochondrial outer surface n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X7K4_GEOCN
W0TYP6_YARLI36.94%3142e-62YALI0B03146p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B03146g PE=4 SV=1
A0A1E3PG58_9ASCO31.35%3037e-50ARM repeat-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_43202 PE=4 SV=1
A0A1D8PMA5_CANAL29.46%2582e-31mRNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PUF3 PE=4 SV=1
A0A060T1G3_BLAAD26.90%2905e-29ARAD1C20284p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C20284g PE=4 SV=1
PUF3_YEAST27.11%2846e-25mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUF3 PE=1 SV=1
A0A1E4TM35_9ASCO25.22%2301e-20Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20765 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.3322

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 100 200 300 400 500 600 700 800 900 1001

Detailed signature matches

  1. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  2. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  3. Domain IPR033133
    Pumilio homology domain
    1. PS50303 (PUM_HD)
  4. Repeat IPR001313
    Pumilio RNA-binding repeat
    1. PS50302 (PUM)
    2. PF00806 (PUF)
    3. SM00025 (pum_5)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_01140_1
MSDRLVDQQNDQSNKTISEKSSYESFKTPAKPIQDYKKSLFDPLEDLGDSQSDVEFAFDNDLEDCNVEIKQNGNISVDTS
SESSPPWITSLFQSVLQSPSDSQSEDLMSISMNDLSVNPRSEFVSNVLNDQAKFSQIKNDASLSHTYSTGPKMSPELDTS
CFETATNEDEIQQYALVHSNAKISGTDSDFTNLDQPLSYRSDSSPFDFKQQKAERAQVYSNPSGAINLTVPNPTDVSRSL
HDITGVTNDFQDGAFQSTEGQNLSFSLTSQKKLALSYSLEKPKSKKQDTESISHIHSTSYDNSAKDYALPNSFSSPEVKY
TQNSPRKFIGKSSGLSESFKTGFPPSKIWGRNTSHSRMERFESLKTSGNTTSSIEMNPSVPANNKINEEKKNIISHHASI
IHDSSTQKTNNGPFDGISQQFSRDQINRYNYNSTQEAAIGFSHAANMQSINNINNPKYNHLSSLAKDRWVKYNGFWNNTE
RNPAESYDFDRFRLANNYTFEQPQIKQNASQNLNFWNRNSEFMNTSTSAFHSQINELHDASEQRFSSIPRIMPFGPNPYQ
SAFSIEKKPSIVASLDPVEKELAALRFNNEMMGTGPNPAHNGLSNMQGIAPINLSDTMNNTNGNFSTNDSVNSFLEAHTI
KRLNLYNEHHNMNASNGVQAIPINQKSDNLVTRGEFNPEPVSFTNDIFYNIPTNDTINYRRLLEKSVTCNWRVIVNRIVR
DNDQQASIFLQQKLKISNSQQRNLIIDSISEFSFELMVNRFGNFLIQRCLEYSNKEQIEKLTESIKGHVCTLAMDPFGCH
VIQKVLDCVEETMKADIVQELLNNIATTMVHRYSCHVWQKLFELRWEGPAPNFMSSVNAQLKGMWAEVALEETGSLVVQN
IFENCFEDDKRPCILEIIKNIDMVIKGQWGNWVIQHMIECASEPYKEQVISIIINNSAIYSVDQYASKVVEKLLKMGNKT
IIQRFLDKVTEKNGRPRIPLIDSRTRITNALIMLYKNQLTF

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003723 RNA binding
GO:0005488 binding

Cellular Component

None predicted.