MCA_00143_1

Protein

Length

1,154 amino acids

Gene name: RET1

Description: DNA-directed RNA polymerase III subunit RPC2

Browser: contigA:382264-385799-

RNA-seq: read pairs 2687, FPKM 28.7, percentile rank 51.5% (100% = highest expression)

Protein function

Annotation:		RET1	DNA-directed RNA polymerase III subunit RPC2
KEGG:	K03021	RPC2	DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
EGGNOG:	0PG3S	RET1	DNA-directed RNA Polymerase
SGD closest match:	S000005733	RET1	DNA-directed RNA polymerase III subunit RPC2
CGD closest match:	CAL0000190208	CAALFM_CR05550CA	DNA-directed RNA polymerase subunit beta

Protein alignments

	%id	Aln length
MIA_00494_1	91.63%	1147	MIA_00494_1
A0A0J9XFV7_GEOCN	83.62%	1160	DNA-directed RNA polymerase subunit beta OS=Geotrichum candidum GN=BN980_GECA14s01264g PE=3 SV=1
A0A060T6K8_BLAAD	78.80%	1151	DNA-directed RNA polymerase subunit beta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B19536g PE=3 SV=1
A0A1E3PCK7_9ASCO	77.46%	1158	DNA-directed RNA polymerase subunit beta OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53794 PE=3 SV=1
A0A167DJD8_9ASCO	78.31%	1148	DNA-directed RNA polymerase subunit beta OS=Sugiyamaella lignohabitans GN=RET1 PE=3 SV=1
Q6CEE6_YARLI	76.15%	1157	DNA-directed RNA polymerase subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B16258g PE=3 SV=1
RPC2_YEAST	75.22%	1150	DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RET1 PE=1 SV=2
UniRef50_P22276	75.22%	1150	DNA-directed RNA polymerase III subunit RPC2 n=385 Tax=Eukaryota TaxID=2759 RepID=RPC2_YEAST
Q59M52_CANAL	74.91%	1160	DNA-directed RNA polymerase subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR05550CA PE=3 SV=1
A0A1E4TJ86_9ASCO	70.21%	1158	DNA-directed RNA polymerase subunit beta OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_76153 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0766

Protein family membership

DNA-directed RNA polymerase, subunit 2 (IPR015712)

Domains and repeats

Domain
52 - 418
RNA polymerase, beta subunit, protrusion (IPR007644)
558 - 619
RNA polymerase Rpb2, domain 4 (IPR007646)
1,065 - 1,149
RNA polymerase Rpb2, domain 7 (IPR007641)
Domain
190 - 379
RNA polymerase Rpb2, domain 2 (IPR007642)
458 - 521
RNA polymerase Rpb2, domain 3 (IPR007645)
640 - 680
RNA polymerase Rpb2, domain 5 (IPR007647)
687 - 1,063
DNA-directed RNA polymerase, subunit 2, domain 6 (IPR007120)

1 200 400 600 800 1000 1154

Detailed signature matches

IPR015712

DNA-directed RNA polymerase, subunit 2
1. cd00653 (RNA_pol_B_...)
  
  53 - 1,149
  
  CDD
  cd00653 (RNA_pol_B_RPB2)
IPR007644

RNA polymerase, beta subunit, protrusion
1. PF04563 (RNA_pol_Rp...)
  
  52 - 418
  
  Pfam
  PF04563 (RNA_pol_Rpb2_1)
IPR007642

RNA polymerase Rpb2, domain 2
1. PF04561 (RNA_pol_Rp...)
  
  200 - 379
  
  Pfam
  PF04561 (RNA_pol_Rpb2_2)
2. G3DSA:3.90.11...
  
  190 - 356
  
  GENE3D
  G3DSA:3.90.1110.10 (G3DSA:3.90.1110.10)
IPR007645

RNA polymerase Rpb2, domain 3
1. PF04565 (RNA_pol_Rp...)
  
  458 - 521
  
  Pfam
  PF04565 (RNA_pol_Rpb2_3)
IPR007646

RNA polymerase Rpb2, domain 4
1. PF04566 (RNA_pol_Rp...)
  
  558 - 619
  
  Pfam
  PF04566 (RNA_pol_Rpb2_4)
IPR007647

RNA polymerase Rpb2, domain 5
1. PF04567 (RNA_pol_Rp...)
  
  640 - 680
  
  Pfam
  PF04567 (RNA_pol_Rpb2_5)
IPR007120

DNA-directed RNA polymerase, subunit 2, domain 6
1. G3DSA:2.40.27...
  
  860 - 1,049
  
  GENE3D
  G3DSA:2.40.270.10 (G3DSA:2.40.270.10)
2. PF00562 (RNA_pol_Rp...)
  
  687 - 1,063
  
  Pfam
  PF00562 (RNA_pol_Rpb2_6)
IPR007641

RNA polymerase Rpb2, domain 7
1. PF04560 (RNA_pol_Rp...)
  
  1,065 - 1,149
  
  Pfam
  PF04560 (RNA_pol_Rpb2_7)
IPR007121

RNA polymerase, beta subunit, conserved site
1. PS01166 (RNA_POL_BETA)
  
  916 - 928
  
  PROSITE patterns
  PS01166 (RNA_POL_BETA)

no IPR

Unintegrated signatures

G3DSA:3.90.11...

357 - 726

GENE3D
G3DSA:3.90.1100.10 (G3DSA:3.90.1100.10)
G3DSA:3.90.18...

1,066 - 1,143

GENE3D
G3DSA:3.90.1800.10 (G3DSA:3.90.1800.10)
SSF64484 (beta and ...)

33 - 1,151

SUPERFAMILY
SSF64484 (beta and beta-prime subunits of DNA dependent RNA-polymerase)

Residue annotation

RPB12 interaction ...

119R

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)

787R

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)

832D

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)

834D

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)

838Q

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)

839V

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)

840G

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)

842K

RPB12 interaction site
119R, 787R, 832D, 834D, 838Q, 839V, 840G, 842K
CDD
cd00653 (RNA_pol_B_RPB2)
RPB1 interaction s...

486G

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

488R

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

489A

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

490L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

492P

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

495F

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

500T

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

677E

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

695H

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

696H

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

697N

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

699S

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

762V

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

763M

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

764S

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

765Y

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

768Y

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

770I

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

771E

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

772D

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

926K

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

928V

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

930G

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

952N

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

954H

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

957P

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

960M

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

965M

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

969V

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

986F

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,013S

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,021Q

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,022A

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,023Y

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,025F

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,038V

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,041K

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,042M

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,043H

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,045R

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,046A

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,067L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,068R

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,069L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,073E

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,075D

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,076C

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,078I

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,080Y

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,081G

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,082A

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,083S

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,084Q

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,085L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,087L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,088E

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,089R

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,090L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,091M

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,092L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,096A

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,129P

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,133K

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,135L

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,137Q

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,138E

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,140I

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,142M

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,143N

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,144I

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,145A

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,147R

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)

1,149K

RPB1 interaction site
486G, 488R, 489A, 490L, 492P, 495F, 500T, 677E, 695H, 696H, 697N, 699S, 762V, 763M, 764S, 765Y, 768Y, 770I, 771E, 772D, 926K, 928V, 930G, 952N, 954H, 957P, 960M, 965M, 969V, 986F, 1,013S, 1,021Q, 1,022A, 1,023Y, 1,025F, 1,038V, 1,041K, 1,042M, 1,043H, 1,045R, 1,046A, 1,067L, 1,068R, 1,069L, 1,073E, 1,075D, 1,076C, 1,078I, 1,080Y, 1,081G, 1,082A, 1,083S, 1,084Q, 1,085L, 1,087L, 1,088E, 1,089R, 1,090L, 1,091M, 1,092L, 1,096A, 1,129P, 1,133K, 1,135L, 1,137Q, 1,138E, 1,140I, 1,142M, 1,143N, 1,144I, 1,145A, 1,147R, 1,149K
CDD
cd00653 (RNA_pol_B_RPB2)
RPB10 interaction ...

735Q

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

736Q

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

757N

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

759V

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

780S

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

783R

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

935Q

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

948D

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

975V

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

976L

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

978G

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

1,009D

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)

1,026F

RPB10 interaction site
735Q, 736Q, 757N, 759V, 780S, 783R, 935Q, 948D, 975V, 976L, 978G, 1,009D, 1,026F
CDD
cd00653 (RNA_pol_B_RPB2)
RPB11 interaction ...

768Y

RPB11 interaction site
768Y, 782D, 934Q, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)

782D

RPB11 interaction site
768Y, 782D, 934Q, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)

934Q

RPB11 interaction site
768Y, 782D, 934Q, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)

1,015I

RPB11 interaction site
768Y, 782D, 934Q, 1,015I
CDD
cd00653 (RNA_pol_B_RPB2)
RPB3 interaction s...

782D

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

783R

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

787R

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

908R

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

910T

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

935Q

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

936E

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

937D

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

940F

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

942D

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

943Q

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,014G

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,015I

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,016T

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,017G

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,018E

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,019C

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,020L

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,021Q

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,023Y

RPB3 interaction site
782D, 783R, 787R, 908R, 910T, 935Q, 936E, 937D, 940F, 942D, 943Q, 1,014G, 1,015I, 1,016T, 1,017G, 1,018E, 1,019C, 1,020L, 1,021Q, 1,023Y
CDD
cd00653 (RNA_pol_B_RPB2)

Protein sequence

>MCA_00143_1
MPSAHHNHTTTSSDEAFNQLLQPTYKGKELTDKIDTAQDKWNLLPAFLKVKGLVKQHLDSFNYFVDVDIKKIVKANEKIV
SDVDPQFYFLYKDIRVGRPQRQEEAARDDIFTPQECRLRDLTYAAPIFVDVEYTRGNKIIVQKGLELARMPIMLRSSKCV
LYGKNELQMADMKECPLDPGGYFIVGGVEKVILVQEQLSKNRIIVEADEKNGIVQASVTSSTHERKSKTYVLTKNEKIYL
KHNSISEEVPIVIMLKAAGIVSDQEILQLVCGSNPQYQDIFAINFEEAAKYGVFTQTQALEYLGTKVRTVRRNTAQKLTP
IQEGIEAIATTIIAHISVENLEFREKALYMAIMTRRVVQTMVNPKMVDDRDYVGNKRLELAGQLMSLLFEDLFKTLNSTF
KEQMDKTLRKRNLATEYDAIPNILSQGRYITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEK
SRKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTDDEEAPIKKLCNVLGAEDISVIGGLELHAKGVYGIYV
NGTIIGVTRFPLKFITKFRQMRRTGKVSEYISIYCNHHHSAVHIATDGGRICRPLIIVENKKPRVTAEHLYKLKAGEMAF
DDFLRQGLVEYLDCNEENDSYIALYEKDIIYETTHMEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGSIAYNQ
LNRIDTLLYFMVYPQQPMVKSRTIELINYDKLPAGQNAVVAVMSYSGYDIEDALVINKGSLDRGFGRCQVMKKNTTVLKR
YARNADRLNGINYEQIHKNQPPVPIPQHSELDVDGLVQVGVKVESGKVYVNKAVPIDTGDITPNLNGNPSTEYRETPVVY
KGPEGSYIDKVMLSSTESEEPLIKVLLRQTRRPELGDKFSSRHGQKGVCGIIVQQEDMPFNDQGINPDIIMNPHGFPSRM
TVGKMIELVSGKAGVLDGSLQYGTCFGGSKLEDMSRILVEKGFNYSGKDMLYSGITGECLQAYIFFGPIYYQKLKHMVMD
KMHARAKGPRAVLTRQPTEGRSKDGGLRLGEMERDCVIAYGASQLLLERLMLSSDAFEVDICQICGLMGYQGWCPTCQAT
ENVVKMTIPYAAKLLFQELISMNIAPRLKLGEVF

GO term prediction

Biological Process

GO:0006351 transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0032549 ribonucleoside binding

Cellular Component

None predicted.

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Entry type

Status

Per-residue features