Protein
MCA_00110_1
Length
1,147 amino acids
Description: protein containing WD40/YVTN repeat-like domain; similar to MCA_00109_1
Browser: contigA:292600-296098-
RNA-seq: read pairs 225, FPKM 2.4, percentile rank 12.7% (100% = highest expression)
Protein function
| Annotation: | protein containing WD40/YVTN repeat-like domain; similar to MCA_00109_1 |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04168_1 | 23.67% | 1259 | 1e-54 | MIA_04168_1 |
| A0A0J9XCC4_GEOCN | 21.41% | 495 | 3e-20 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA09s00560g PE=4 SV=1 |
| UniRef50_A0A0J9XCC4 | 21.41% | 495 | 5e-17 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCC4_GEOCN |
| A0A060T2N8_BLAAD | 22.39% | 402 | 1e-14 | ARAD1A02882p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02882g PE=4 SV=1 |
| A0A167ESQ9_9ASCO | 25.00% | 268 | 5e-09 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_2001 PE=4 SV=1 |
| A0A1E3PCV7_9ASCO | 23.09% | 472 | 2e-07 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53476 PE=4 SV=1 |
| Q6C4R2_YARLI | 19.83% | 923 | 1e-06 | YALI0E24387p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E24387g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0160
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1147
Detailed signature matches
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
-
NON_CYTOPLASM... (N...)
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PF10433 (MMS1_N)
-
-
TRANSMEMBRANE (Tran...)
Protein sequence
>MCA_00110_1 MVNWKGVLKYQINDSPLVQWVFPYNKDVVVIRKSSITLGAYTESLYTGILNAYVYEDQYSKTDKLILVVSSGYLLIADLT LRPWKIVSHFPLQKSKTSDFSVNSLGWNIACNSSILVLSSLRNRFQLFRLKALPMAATKSILLEYSDNFQYYDEERLTLK IDFVHHRDPNTDVKLWIALSINKNHQIEVVLYEWDCKKPFETISIVGELEITPFGAEIPKFLIPITPSDGVFLLVGNSKI IMITIYEIIQKRCNTSQISLPDSPVSYFMESFDVTEDNDVRFIYFGTTTNKIYQLEIDLDIGTMNLSLFTNSPIAIGSSL ILISCDQDGNTSREKLLWTEYVLMHTGGNGVIGGSIIIRKEKKLSYQDDTLFNPFSPFQNHGIIYDALYPTNQESLEMSN ESLKHIMIASGSSQDSWGIATICYGIKAESSNIQLDMYPGAKIFTNYYLNSTAPYLLIISSPIKTKVYEFDNSSDGVEIL GLTDRSAFELNHRTISLGSTQRYNIQVHLKGVNITNLKSDKLVVAINDMEIKKAYIYKNFVVICHESKPAGFGYYVSLYE VLDSRISNEVFNLVGTRLLGTNLDTVSIVKVIQVSSIPYIFIGTNVDTNGHFKMFRFNETMEPILHFNDVMLTIKDVISV NDVLLIGLASGFYISGKIENDKFSIFKTFQIGRHNSVEFLEVENEIIILGDHIHIISRDSCVFKTPTLISTDNNSPITSM CLYPKTDSTCYSILALTESLLTIYDISANQSPSIVPQTVTTSTSPRKIIFLSFYNLIAVLHQSSYCNQLKVPFLEFVDPK TSLIVPFYQTSADDWLMSKSQKSKSAEAVFEEANCMMEWAIKIDGGDYPFIVVGTTFSTKGYVYILELVESKETENGKLA IMLKRRYSISIRNGIVLSVCHVPGNIIAVGTPNAIEFYQLIHCDKTQKYKFTLFNSISSIGDPVTDIQVFGDTLSILTQK KSIKMITINENAKPPDISDISDISVNKPLLLRQFFLDKDTLVLTNKKSMVHIFHRSANDRFEPIFKLKFPTMIMKVVPMS SENNILLRSLTKNGDVKAMVMIGLDGSIFMVILLGTSIYNIIESRASMVRFDEDDNLPQNLISRSASSFWREKESTVNII NGDDLPEFYYQDDFLSRFIDKNLINNY
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.