Protein

MIA_04168_1

Length
1,201 amino acids

Browser: contig05:956563-960230-

Protein function

EGGNOG:0PTREPGUG_03630NA

Protein alignments

%idAln lengthE-value
MCA_00109_128.176%12287.47e-119MCA_00109_1
A0A0J9XCC4_GEOCN23.887%12358.42e-70Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA09s00560g PE=4 SV=1
UniRef50_A0A0J9XCC423.887%12351.72e-66Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XCC4_GEOCN
A0A060T2N8_BLAAD22.510%11951.42e-35ARAD1A02882p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02882g PE=4 SV=1
A0A1E3PCV7_9ASCO22.344%12803.02e-33Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53476 PE=4 SV=1
A0A167ESQ9_9ASCO21.437%8918.38e-18Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_2001 PE=4 SV=1
Q6C4R2_YARLI20.351%2855.30e-06YALI0E24387p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E24387g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2920

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1201

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR004871
    Cleavage/polyadenylation specificity factor, A subunit, C-terminal
    1. PF03178 (CPSF_A)
  3. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TRANSMEMBRANE (Tran...)

Protein sequence

>MIA_04168_1
MSWSGVVKYTLSPSAYVIQSFFYVDKNGGVDIVIVKTESVTYKDKTVSIFSRILQASVIRGKTNQSNDILVLVLFSGHLL
FVDLTTWSIIKKIQIQGLNCLSYPVDCIGWKIASDALGKVVALASSNSIEFYTPPKEHGFNSSIIHHHRIDLDAQIILNI
LFLPYQKGTSSLHLMFVALYLSKLGDLKISLYSWWTENSISSIAHYGTTPLPPTLEHCYPLFMIPVFCNTGAILLICQNS
KTKSITASVITVNDLVSATLEHDVITIPEAPTAYYQENELFRFSQLTQQYTNDQTVYLASESNKIYQLLINTKSGDMHIQ
EFLHLPFSIGSTLLLRYYDSNNEMIVNSSPEETDYLSIHTNGNGTIGGNFFFSKTENEYQLLYYDRSQNWGPIHDGIEID
TEASFTYSDYHHKKSEIFLASGTTYNSWELNHVRHGVRAIHRFTDLELIMGSQVFSASIDRHTFNSSNLSSFNYILTTSF
AGTRIFKSVLLKTNHDDNFGDQSIEELSQDLPMDFSNETRAFSSFNGHLIQVTTKKIIITDLNESTLQEELEFISRAHIF
ENYILISSFPLNSEIDSSSQSKTVKIILYRFDVDSSNNSLTLIAKNQMELDSLTDVTSLWIVPSTIEDSSQFVYVFVSIL
TDIKSSLKIYYVDDKKELTNIHYITNGIDTPVDIVSVSSDDIWYNAILVGQRNGTYFYAEWNDSEFFIRFSYTIGDSIDV
KFIKDGEKVFALCGFIYRLSSLDFVSPFRPELVVFDRNELDFPSSFSFFSPQALKRTDAVVFVAVFGDKLAIVEATGSSG
YFTKSTPLAGPPRKLLYLDYVGVIATILNFSYELGNGEENNIQQSLIQFIDPKTSSVLESEKWKPTSQSLKQSSSGGTYY
PAIENIDKFMCMMVWTFEKNTDVYKYLVIAGESNKKGQLYLLDVRRKKASSNIELRRRFSKSFNSPVTSIDQLDNNTIIC
VTSSSVELLRLELDNQSGNEKPAYRLNRLDFTLNTPMRHVSVKNQFVYLSSSSSVQVYKYHHDRVSLLQSEDKIRTCISQ
TVLDDNTLIVTDSSKNITIYGSSSYIQTVTSTNLQVLSEIQFPTLIIKVFPIKATKNDYLLKHMDPEQISKESGNQTLDL
IALGIDGSMYMLHLINGANYKFLRTSIEKLSETSSAGLESVALREDRKHTRVIDLDEVSKRHSSAEWVKFAARFNPINKY
W

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0005515 protein binding

Cellular Component

GO:0005634 nucleus