Protein

MIA_06399_1

Length
439 amino acids

Browser: contig11:352823-354197-

Protein function

EGGNOG:0PJZ3NOP12nucleolar protein 12
SGD closest match:S000005401NOP12Nucleolar protein 12
CGD closest match:CAL0000199505NOP12Nucleolar protein 12

Protein alignments

%idAln lengthE-value
MCA_06276_163.758%2983.27e-117MCA_06276_1
A0A0J9XJ01_GEOCN61.538%2862.78e-103Similar to Saccharomyces cerevisiae YOL041C NOP12 Nucleolar protein involved in pre-25S rRNA processing and biogenesis of large 60S ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA20s00285g PE=4 SV=1
UniRef50_A0A0J9XJ0161.538%2865.69e-100Similar to Saccharomyces cerevisiae YOL041C NOP12 Nucleolar protein involved in pre-25S rRNA processing and biogenesis of large 60S ribosomal subunit n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJ01_GEOCN
A0A167FWK3_9ASCO57.198%2577.10e-97Nop12p OS=Sugiyamaella lignohabitans GN=NOP12 PE=4 SV=1
A0A060TBA3_BLAAD55.019%2693.51e-96ARAD1B06578p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B06578g PE=4 SV=1
NOP12_YARLI52.830%2653.89e-89Nucleolar protein 12 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NOP12 PE=3 SV=1
A0A1E3PMT1_9ASCO51.550%2581.64e-88RNA-binding domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_78112 PE=4 SV=1
NOP12_CANAL48.525%3058.15e-79Nucleolar protein 12 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NOP12 PE=3 SV=2
NOP12_YEAST46.488%2992.90e-75Nucleolar protein 12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP12 PE=1 SV=1
A0A1E4TH14_9ASCO48.594%2492.16e-76Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_25455 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2060

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 439

Detailed signature matches

  1. Domain IPR000504
    RNA recognition motif domain
    1. SSF54928 (RNA-bindi...)
    2. SM00360 (rrm1_1)
    3. PS50102 (RRM)
    4. PF00076 (RRM_1)
  2. Domain IPR034777
    Nop12, RNA recognition motif 1
    1. cd12669 (RRM1_Nop12...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.30.70...
  3. mobidb-lite (disord...)

Protein sequence

>MIA_06399_1
MVDLFNISEDKLDTSVGSLFSSSAGPVVRPGNKSLESDPAPSKTTKVSTIPKTDKKLKRKREENEGKVEEHEQKESDDDD
NDSSDEQDGFSVEDKWVEKQQNRKKNSKEVSDLSEADDKEGSEEDEESEEKKDTQDNKPKISQQEIDKADSTVFVGNVPI
TTITSKQVYKKFQELFETVGKVTSIRFRSIAFSQLLPRKAAFIKQQLHPTRKAANAYVVFETPEQARKSVSLNASVFEGH
HLRVDRVSHPASQDNKRCVFVGNLDFDMDEEPLWQHFGACGEIEHVRIVRDSKTNFGKGFCYVQFKDPVSVTKALLLNGK
KINEDAKSRELRVVRSKNIREAQKQRKAFIKSKTSNKNSNKKVKLSLEEKTKLGRAKTAVGKAARAEITSVLEGTRAKKG
DYIPGIKQGGKKKKPRIRERSTNYKNLRKEVQKANKAST

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.