Protein
MIA_05710_1
Length
840 amino acids
Browser: contig09:119107-121684-
Protein function
| EGGNOG: | 0PGG4 | FG07338.1 | RNA polymerase II Elongator subunit |
|---|---|---|---|
| SGD closest match: | S000003432 | ELP2 | Elongator complex protein 2 |
| CGD closest match: | CAL0000181143 | orf19.2711 | Elongator subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_05851_1 | 54.039% | 879 | 0.0 | MCA_05851_1 |
| A0A0J9XJQ2_GEOCN | 46.682% | 844 | 0.0 | Similar to Saccharomyces cerevisiae YGR200C ELP2 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA OS=Geotrichum candidum GN=BN980_GECA22s01011g PE=4 SV=1 |
| UniRef50_A0A0J9XJQ2 | 46.682% | 844 | 0.0 | Similar to Saccharomyces cerevisiae YGR200C ELP2 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJQ2_GEOCN |
| A0A1E3PPR4_9ASCO | 40.968% | 847 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_56273 PE=4 SV=1 |
| A0A060T398_BLAAD | 39.307% | 837 | 1.42e-166 | ARAD1A07942p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A07942g PE=4 SV=1 |
| ELP2_YEAST | 38.543% | 851 | 5.26e-165 | Elongator complex protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ELP2 PE=1 SV=1 |
| A0A167FXU8_9ASCO | 38.295% | 833 | 2.00e-165 | Elongator subunit ELP2 OS=Sugiyamaella lignohabitans GN=ELP2 PE=4 SV=1 |
| A0A1D8PLN7_CANAL | 35.506% | 859 | 1.08e-154 | Elongator subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2711 PE=4 SV=1 |
| Q6CAY3_YARLI | 37.095% | 833 | 2.41e-149 | YALI0C23386p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C23386g PE=4 SV=1 |
| A0A1E4TAH6_9ASCO | 34.450% | 836 | 3.36e-110 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32265 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0661
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
600
700
840
Detailed signature matches
-
-
PS00678 (WD_REPEATS_1)
-
no IPR
Unintegrated signatures
-
-
-
-
-
SSF117289 (Nucleopo...)
Protein sequence
>MIA_05710_1 MPLSISNELIAIGANRHVDSADWDQTNEILAFGGGHLINLWRPLTPSNVYLSLKGHTAEVTCVKFVENGALIISASADGQ VNVWSRDSDSLSYSLLQEFGDHHQQSVTTLSATKGALSSVIVSGSSDGHLAFWVVDLSIPDSPVSLISNLNLGVSTLPLA SAIAFLPNNNPSPNDPPQPDQFAVAVGNTSKYTYIYVGGPDQPFSEAAKLEGQSDWVRALAFSNIQPNGSIYLASGCQDR YIRIWNLFQGSYDPLASAEQNIHDYEDEQTRQLSNKVYPLNTSSSSHSQYSMKFDALIIGHDDWIYSLQWHPSKLQLMSS SADSSIMIWSPDQLSGVWLSKTQLGDISIKGASTATGAYGGMWFSSWIGSDYRFIISLSNTGAWKCWSQVDENSHIWKPE RGISGHFKSVTDVSWSTDGRYLLSTGLDKTTRLFAPWLKSSTTPPGTKHKWYEMARPQIHGYDMIAIESLSPSVFVSAGD EKVLRAFTITKSLATLLNNTIGLTIDTEALSSGAATVPALGLSNKAGSGDADLVDEVAEEDKEMGTEATEDIGIDEHAPP LEDQLQRLTLWPEIEKIYGHGYEVTTLAISHDRSLVVSSCKANSKDHAVIRITDTQTWQKEFKPLSFHTLTPTSLKFSPD DKYLLSVSRDRTWALWQRNNTSIQETGNSIFDLLETSKLHTRIVWDCCWAHIPGNKAYYFFTASRDKTVKVWTQASPSDD SAADKKKWENVLGIQFKESVTAIDIKYMPEIGKHVLAAGLDDGAVSLIELDLENAAADHKIDAALAVKVDSTITPSGRIT KLAWNPHPENLAGLDGDKSPSNLLAIASEDRSVRILKVSV
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.