Protein

MIA_05663_1

Length
379 amino acids

Browser: contig08:1024152-1025341+

Protein function

EGGNOG:0PIANFG00715.1Sporulation protein RMD5
SGD closest match:S000002663RMD5Sporulation protein RMD5
CGD closest match:CAL0000175041orf19.6850Ubiquitin-protein ligase

Protein alignments

%idAln lengthE-value
MCA_03394_157.256%3796.58e-168MCA_03394_1
A0A0J9XH53_GEOCN54.090%3791.06e-163Similar to Saccharomyces cerevisiae YDR255C Component of GID Complex that confers ubiquitin ligase (U3) activity OS=Geotrichum candidum GN=BN980_GECA17s01330g PE=4 SV=1
UniRef50_A0A0J9XH5354.090%3792.18e-160Similar to Saccharomyces cerevisiae YDR255C Component of GID Complex that confers ubiquitin ligase (U3) activity n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XH53_GEOCN
A0A060T2S7_BLAAD48.168%3826.05e-132ARAD1C30844p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C30844g PE=4 SV=1
A0A1E3PN00_9ASCO45.550%3824.67e-115Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82526 PE=4 SV=1
A0A161HMY3_9ASCO48.134%2681.10e-98Ubiquitin-protein ligase RMD5 OS=Sugiyamaella lignohabitans GN=RMD5 PE=4 SV=1
Q6CGJ4_YARLI38.636%3961.25e-96YALI0A18788p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A18788g PE=4 SV=1
A0A1E4TCN7_9ASCO37.736%3714.31e-91Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4124 PE=4 SV=1
RMD5_YEAST26.286%3502.04e-26Sporulation protein RMD5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RMD5 PE=1 SV=1
Q59RB2_CANAL28.144%1671.94e-08Ubiquitin-protein ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6850 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2345

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 50 100 150 200 250 300 350 379

Detailed signature matches

  1. Domain IPR006594
    LIS1 homology motif
    1. PS50896 (LISH)
  2. Domain IPR006595
    CTLH, C-terminal LisH motif
    1. SM00668 (ctlh)
    2. PS50897 (CTLH)
  3. Domain IPR024964
    CTLH/CRA C-terminal to LisH motif domain
    1. PF10607 (CLTH)
  4. Domain IPR013144
    CRA domain
    1. SM00757 (toby_final6)
  5. Domain IPR013083
    Zinc finger, RING/FYVE/PHD-type
    1. G3DSA:3.30.40.10
  6. Domain IPR027370
    RING-type zinc-finger, LisH dimerisation motif
    1. PF13445 (zf-RING_UBOX)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. Coil
  3. NON_CYTOPLASM... (N...)
  4. SSF57850 (RING/U-box)
  5. TRANSMEMBRANE (Tran...)
  6. cd16652 (dRing_Rmd5...)

Protein sequence

>MIA_05663_1
MEQIINEFSRLSQSKGFEKCISEVDMFINSLELVRNKIISDPENINVYLGNLKKEIKQLSAKIKSAEKEIYSSISKFGKC
LDKVFKLDLSFAYNPTLFSIQHKDELDKAILMHFARSGYFEVVYDFRDEANVTLSTDLIEQFSVMYSIVQSIQKKDLEPA
IQWAISKRRQLLDHGSNLEFILHKVKFIKMLQEENNDLKALAYAQTNMFYFGERHLAEISKLITSILYYRSGRFSPYRDL
FEMPSYDKLSWLFSAEFCSLIGLSPETPIYLAVLAGTMALPVLAKMGAVMKSQKAEWSSANELPTEIELPSSLIFHQIFV
CPVSKEQTTDSNPPMLLPCGHIIADQSLTSMKKDTVSGKMKCPYCPMTSTYNESRRVYF

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.