MIA_05178_1

Protein

Length

267 amino acids

Protein function

EGGNOG:	0PN8Y	SRP102	signal recognition particle receptor subunit beta
SGD closest match:	S000001637	SRP102	Signal recognition particle receptor subunit beta
CGD closest match:	CAL0000180632	CAALFM_CR07660CA	Signal recognition particle receptor subunit beta

Protein alignments

	%id	Aln length	E-value
MCA_06254_1	68.482%	257	1.82e-123	MCA_06254_1
A0A0J9XK15_GEOCN	55.230%	239	2.43e-89	Similar to Saccharomyces cerevisiae YKL154W SRP102 Signal recognition particle (SRP) receptor beta subunit OS=Geotrichum candidum GN=BN980_GECA23s01143g PE=4 SV=1
UniRef50_A0A0J9XK15	55.230%	239	4.98e-86	Similar to Saccharomyces cerevisiae YKL154W SRP102 Signal recognition particle (SRP) receptor beta subunit n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XK15_GEOCN
A0A161HNL4_9ASCO	36.885%	244	1.55e-48	Signal recognition particle receptor subunit beta OS=Sugiyamaella lignohabitans GN=SRP102 PE=4 SV=1
A0A060TAI6_BLAAD	36.735%	245	5.71e-49	ARAD1B00616p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B00616g PE=4 SV=1
A0A1E3PKX0_9ASCO	32.061%	262	5.87e-46	p-loop containing nucleoside triphosphate hydrolase protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50887 PE=4 SV=1
SRPB_YEAST	33.725%	255	1.33e-33	Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP102 PE=1 SV=1
Q59N43_CANAL	27.213%	305	3.97e-20	Signal recognition particle receptor subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR07660CA PE=4 SV=1
Q6C8Q0_YARLI	27.309%	249	3.38e-18	YALI0D17952p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D17952g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.3828
Predicted cleavage: 32

Protein family membership

Signal recognition particle receptor, beta subunit (IPR019009)

Domains and repeats

Domain
44 - 191
P-loop containing nucleoside triphosphate hydrolase (IPR027417)

1 50 100 150 200 267

Detailed signature matches

IPR019009

Signal recognition particle receptor, beta subunit
1. PF09439 (SRPRB)
  
  43 - 215
  
  Pfam
  PF09439 (SRPRB)
2. cd04105 (SR_beta)
  
  45 - 262
  
  CDD
  cd04105 (SR_beta)
IPR027417

P-loop containing nucleoside triphosphate hydrolase
1. SSF52540 (P-loop co...)
  
  44 - 191
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)

no IPR

Unintegrated signatures

CYTOPLASMIC_D... (C...)

30 - 267

PHOBIUS
CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
G3DSA:3.40.50...

37 - 264

GENE3D
G3DSA:3.40.50.300 (G3DSA:3.40.50.300)
NON_CYTOPLASM... (N...)

1 - 5

PHOBIUS
NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
TMhelix

10 - 32

TMHMM
TMhelix (TMhelix)
TRANSMEMBRANE (Tran...)

6 - 29

PHOBIUS
TRANSMEMBRANE (Transmembrane region)

Residue annotation

G1 box cd04105

51G

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)

52P

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)

53P

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)

54S

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)

55G

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)

56G

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)

57K

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)

58T

G1 box
51G, 52P, 53P, 54S, 55G, 56G, 57K, 58T
CDD
cd04105 (SR_beta)
GTP/Mg2+ binding s...

53P

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

54S

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

55G

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

56G

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

57K

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

58T

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

59S

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

72T

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

75T

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

104G

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

166N

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

167K

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

169D

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

249V

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)

250K

GTP/Mg2+ binding site
53P, 54S, 55G, 56G, 57K, 58T, 59S, 72T, 75T, 104G, 166N, 167K, 169D, 249V, 250K
CDD
cd04105 (SR_beta)
dimer interface cd...

64L

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

71D

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

72T

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

73V

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

74T

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

75T

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

77I

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

78P

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

88F

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)

105H

dimer interface
64L, 71D, 72T, 73V, 74T, 75T, 77I, 78P, 88F, 105H
CDD
cd04105 (SR_beta)
G2 box cd04105

72T

G2 box
72T
CDD
cd04105 (SR_beta)
Switch I region cd...

79N

Switch I region
79N, 80V, 86I, 87P, 88F
CDD
cd04105 (SR_beta)

80V

Switch I region
79N, 80V, 86I, 87P, 88F
CDD
cd04105 (SR_beta)

86I

Switch I region
79N, 80V, 86I, 87P, 88F
CDD
cd04105 (SR_beta)

87P

Switch I region
79N, 80V, 86I, 87P, 88F
CDD
cd04105 (SR_beta)

88F

Switch I region
79N, 80V, 86I, 87P, 88F
CDD
cd04105 (SR_beta)
G3 box cd04105

101D

G3 box
101D, 102L, 103P, 104G
CDD
cd04105 (SR_beta)

102L

G3 box
101D, 102L, 103P, 104G
CDD
cd04105 (SR_beta)

103P

G3 box
101D, 102L, 103P, 104G
CDD
cd04105 (SR_beta)

104G

G3 box
101D, 102L, 103P, 104G
CDD
cd04105 (SR_beta)
Switch II region c...

105H

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

106P

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

107K

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

108L

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

109I

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

110H

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

111H

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

112L

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

113D

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

114E

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

115A

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

116L

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

119N

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

120S

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)

123K

Switch II region
105H, 106P, 107K, 108L, 109I, 110H, 111H, 112L, 113D, 114E, 115A, 116L, 119N, 120S, 123K
CDD
cd04105 (SR_beta)
G4 box cd04105

166N

G4 box
166N, 167K, 168A, 169D
CDD
cd04105 (SR_beta)

167K

G4 box
166N, 167K, 168A, 169D
CDD
cd04105 (SR_beta)

168A

G4 box
166N, 167K, 168A, 169D
CDD
cd04105 (SR_beta)

169D

G4 box
166N, 167K, 168A, 169D
CDD
cd04105 (SR_beta)
G5 box cd04105

248S

G5 box
248S, 249V, 250K
CDD
cd04105 (SR_beta)

249V

G5 box
248S, 249V, 250K
CDD
cd04105 (SR_beta)

250K

G5 box
248S, 249V, 250K
CDD
cd04105 (SR_beta)

Protein sequence

>MIA_05178_1
MGLQFVSANITGILVALVCILLGIALTVYRTGSNLPGRRKRNSQPTIIIAGPPSGGKTSLYTLLTTGKVEDTVTTQIPNV
YNSFSIPFDSETDASRITLIDLPGHPKLIHHLDEALLVNSNIKGILFVLDSAGGTRGIEQAAQYLFRVLSRTEYRLGGID
MMIACNKADLFSMVPAAKLRKILEKELTFIRDARAQGLGTVKNEDTLGGQAAAKDNAEDDDVEGSWLGQGEPIDFSKLDG
EIAIADGSVKTKSVEAWKRWIEGVGVN

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features

MIA_05178_1

Protein function

Protein alignments

Mitochondrial localization by mitoprotII

Protein family membership

Domains and repeats

Detailed signature matches

Residue annotation

Protein sequence

GO term prediction

Biological Process

Molecular Function

Cellular Component