Protein

MIA_03132_1

Length
856 amino acids

Browser: contig04:308336-310907-

Protein function

EGGNOG:0PFWWTAF5transcription initiation factor tfiid subunit
SGD closest match:S000000402TAF5Transcription initiation factor TFIID subunit 5
CGD closest match:CAL0000173973CAALFM_CR04450CAChromatin modification protein

Protein alignments

%idAln lengthE-value
MCA_03863_164.093%8160.0MCA_03863_1
A0A060T8F1_BLAAD56.863%6630.0ARAD1D05940p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D05940g PE=4 SV=1
A0A0J9XHT3_GEOCN58.735%6640.0Similar to Saccharomyces cerevisiae YBR198C TAF5 Subunit (90 kDa) of TFIID and SAGA complexes OS=Geotrichum candidum GN=BN980_GECA17s01077g PE=4 SV=1
Q6CEN7_YARLI54.046%6550.0YALI0B14245p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B14245g PE=4 SV=1
UniRef50_Q6CEN754.046%6550.0YALI0B14245p n=3 Tax=Dipodascaceae TaxID=34353 RepID=Q6CEN7_YARLI
A0A1E3PKV2_9ASCO53.125%6720.0WD40 repeat-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13985 PE=4 SV=1
A0A167EJ71_9ASCO53.499%6860.0Taf5p OS=Sugiyamaella lignohabitans GN=TAF5 PE=4 SV=1
A0A1D8PSS1_CANAL51.029%6800.0Chromatin modification protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR04450CA PE=4 SV=1
A0A1E4TCQ6_9ASCO49.548%6640.0Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32739 PE=4 SV=1
TAF5_YEAST43.608%7040.0Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0204
Predicted cleavage: 48

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
  4. Repeat
1 100 200 300 400 500 600 700 800 856

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR007582
    TFIID subunit TAF5, NTD2 domain
    1. cd08044 (TAF5_NTD2)
    2. PF04494 (TFIID_NTD2)
  3. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
  4. Repeat IPR001680
    WD40 repeat
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
  5. Repeat IPR020472
    G-protein beta WD-40 repeat
    1. PR00320 (GPROTEINBRPT)
  6. SITE IPR019775
    WD40 repeat, conserved site
    1. PS00678 (WD_REPEATS_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.10...
  2. G3DSA:2.40.50...
  3. SSF160897 (Taf5 N-t...)
  4. cd00200 (WD40)
  5. mobidb-lite (disord...)

Residue annotation

  1. homodimer interfac...
  2. Ca binding site cd...
  3. structural tetrad ...

Protein sequence

>MIA_03132_1
MSSQQQQPPPQQQQQQRQQKQPTSQSPPPPQGIPGAAGLQNPPQQRPSASQHSDVSRTVIDHLNKTGFTRNDATARIESS
RIATPTLSQNNAQPDSGAGPFYPNGLNSYYKSALSPEKRVTSGPVSGPKYLPDGSAGPPPTTTTPAKSSFSSSSGSTDSA
PKLTSAAAAAAAAAAASARQLDKPPSVATQAQQQHIYNTHDRPYLALRDWTEKSLDLYKPELCRVLYPVFVHIYLDLIAK
GCVKQAKDFFEENAADHATLHYQDLLVLSRISLPAHIEVNELTKAFRNNKYVIKVSRTTFDLLVYFLHEIEDIGGSAIIR
IINQYIEAKITTARPSRFSTEYVLDPEEGLPGVSYTPNASGTKPSDSSSSTTQAGPQQLKLGRLPLDPEFEKDVEMEIAD
ENKTDPQEGDLLIKEFQKMHAKEPDSPFRSALPLPAYRAADIASEIQAVKDTRNRISIGTTQTALPSVCMYTFHNTHDDL
NNLAFSADASLVAAGFADSFIKIWSLKGKRLKSVLRDDEFNYVDMNGVASENPDTSVLARRLVGHAGPVYGLSFSPDNRY
LLSSSEDRSVRLWSMDTYTGLVAYKGHTGPVWDVSFGPFGHYFATASHDQTARLWSVDHIYPLRIFAGHLSDVDTVSFHP
NSMYVVTGSSDKTCRLWDINRGNSVRVFTGHTAPINVTTVSPDGRWLASAGEDNVINVWDLGSGLRLKTMRGHGRSSIYS
LAFSQEGSVLVSSGADCTVRVWDVRRGTNDQGPEPIETYVDPSLAAGGGSGSVAAAAAAAAANDSSDDKNDKTRSGGSIS
GAAGKPGATSDFEGRKRKEVPVTEDHLAVFNTKKTPVYKVQFTSRNLCIAGGAFMG

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.