Protein

MIA_01971_1

Length
270 amino acids

Browser: contig02:2234636-2235449-

Protein function

EGGNOG:0PQ32USB1Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA (By similarity)

Protein alignments

%idAln lengthE-value
A0A060T325_BLAAD31.250%1126.06e-07ARAD1C37466p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C37466g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0017

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR027521
    U6 snRNA phosphodiesterase Usb1
    1. PF09749 (HVSL)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.90.11...
  2. mobidb-lite (disord...)

Protein sequence

>MIA_01971_1
MSLVDYSDSDDDSDAETTHPPSPPPPPSSFLNLYCLPPKLSAAFHSHPRAVPHTDGAYPSHVYLAWRPDPPQAAALAAIL
AHCRQALPSLLASAPPPPACHSLLESATGAPQPLHVSLSHTLMVPQQRLPEFSAAMRVALAAGPDDPPGSAAISVGASWT
LLPSSDGSKTFVALLLDDNAAKSRVVRAIERVNRALQQLAGASQAPYPPLASTLPHVSIACVDAPFVACASALASAHPPI
RVPLKQMGACVKTGRQICPIEAFCKQTTSP

GO term prediction

Biological Process

GO:0034477 U6 snRNA 3'-end processing

Molecular Function

GO:0004518 nuclease activity

Cellular Component

None predicted.