Protein

MIA_01365_1

Length
1,358 amino acids

Browser: contig02:483445-487549-

Protein function

EGGNOG:0PHDRFG08910.1Nonsense-mediated mRNA decay protein
SGD closest match:S000003893NMD5Nonsense-mediated mRNA decay protein 5
CGD closest match:CAL0000186626orf19.5834Uncharacterized protein

Protein alignments

%idAln lengthE-value
MCA_00180_145.397%7930.0MCA_00180_1
A0A0J9X6A1_GEOCN33.017%5273.04e-73Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin OS=Geotrichum candidum GN=BN980_GECA03s05906g PE=4 SV=1
UniRef50_A0A0J9X6A133.017%5276.21e-70Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X6A1_GEOCN
A0A1E3PE12_9ASCO27.479%4842.39e-54ARM repeat-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53196 PE=4 SV=1
A0A060T437_BLAAD25.660%6821.55e-52ARAD1A14058p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A14058g PE=4 SV=1
A0A167DGX5_9ASCO25.153%6522.73e-49Nmd5p OS=Sugiyamaella lignohabitans GN=NMD5 PE=4 SV=1
Q6C5P6_YARLI22.715%7226.16e-42YALI0E16324p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E16324g PE=4 SV=1
A0A1E4THG4_9ASCO24.324%5182.73e-38Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_121299 PE=4 SV=1
NMD5_YEAST22.887%8522.20e-37Nonsense-mediated mRNA decay protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMD5 PE=1 SV=2
A0A1D8PGN9_CANAL22.245%4811.42e-28Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5834 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0432

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1200 1358

Detailed signature matches

  1. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  2. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  3. Domain IPR001494
    Importin-beta, N-terminal domain
    1. PS50166 (IMPORTIN_B_NT)
    2. PF03810 (IBN_N)
  4. Domain IPR013713
    Exportin/Importin, Cse1-like
    1. PF08506 (Cse1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. NON_CYTOPLASM... (N...)
  2. SIGNAL_PEPTIDE (Sig...)
  3. SIGNAL_PEPTID... (S...)
  4. SIGNAL_PEPTID... (S...)
  5. SIGNAL_PEPTID... (S...)
  6. mobidb-lite (disord...)

Protein sequence

>MIA_01365_1
MGLSSLSQAFLASIDSNQNTRLAAEAHLEACSSSPDIPLACLTLAVSSDSHPVVQQSAAVFLKNLVLKYWAISLNSTNFT
SNQSSRRSSPPLNSSGPAGITASAPINTPDLSINSYLSQPPLSINKPPPTPTGNNPVPISPAVLLERSPFKSFSNIQINE
FKQQVLYSFHLASPVVANYLSTIISIFLKTSDIPQWPELLPITIKMLTDSDPNVIFSGVLVCLEITRYMNNLPLQNQQTS
QLRIDIVSLLFPQLLKIALSLSSETHSRAGLILWKILKCYKLAIRQDFPEYLQQEAQLKDWLTFFLHILSSTYTATNNNP
VSSSTTISPSAPSPSSTLAQHECHIGPNRNNNSIDRSSNSPSLSSSSSASFSSSSTSPSSQDSFSDVSSNKLLDCAARSS
VCPWSKCKKNACIILSHLMVTYTSSTSSRVSQIRVKKDYARFSEIYLRYFGPDICHVFVKDIETWDQHFSSNSSSSNMTD
AALNLSKSPSAVEAIINFFEIAISIDTLWQKILPKMEVIVSHLIFGNLMLSESDLEAFYYNPEDYILTNIENSDFSTRGK
ALKFLKLLVKERQNDMFQGIIMFINRSISGYNEDPNNLQRILEKDAALQMMIELKNNITDGSSPISSQINSVILEQVISN
NSVKGNGNGSVNESSAGSVNQNQALLLSRSCEVITSFSNVVYTSSELEQVFRHVMRCFNNPGIIVQFNAAFALRMLFTTY
ESICEVLGDQISQIMQKMLHLYEEVNSECLASVMEDLIDKFTLQLAPFSTQLCSQLLDQFFRILGEINDHNRSNDDNNDD
SEGFSFVDDRQMVAVGILNALGTLLIALEKSPTHIAKLEPYLLPMFKTIIENANYTFYQEVFELLDTCLYTLRCITPNMV
QVIGMMRKGFKKNPSQCCEYYGPVICNLFKFGFSQAKQQQIQQNFNEPRNQGTAYPQDLIDLSFELVSYFLAPKDALTGE
DISSEDTETACTVAQTLFLTAATVGLQFDAMEQKYFSEIIARSLGALSRVISSVVTYRAFIEVILTAALYNPSQVSDVLI
QYNCFNWIIEVAASRSNLFNRPYDKAVAGLSLLNIAGACSERGDGYEEVFPRVLNLVLTYMSGYYKHLQQEQHRARNRNS
FVFGQNNLSFEDPFVYEIQNQNGSGSNDNSAQQFTFVDESAQNYDLVLIVVGSSPWTGNSSYQESLVSDPALDSALDNLG
VFRMYQEIMLRLAGPDSIALARVNVPGTSGSTHQHTLNSLASTSSPGPSSVVSLVGASATSGAGNQDPQSDRHCTNSGFS
TPYEASVTGSSPGGGAAGLAGSRHSSFSGSINGDCTQLGHNNVSNNSHQAYYSRVLSNVLQDPALFSVHRGIIGTVGW

GO term prediction

Biological Process

GO:0006886 intracellular protein transport

Molecular Function

GO:0005488 binding
GO:0008536 Ran GTPase binding

Cellular Component

None predicted.