Protein

MIA_00489_1

Length
1,079 amino acids


Browser: contig01:1411603-1414843-

Protein function

EGGNOG:0PHFHCCR4Acts as catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover. CCR4 has 3'-5' RNase activity with a strong preference for polyadenylated substrates and also low exonuclease activity towards single stranded DNA. Discovered because of its role in the control of ADH2 gene expression. It is required for the expression of genes involved in non-fermentative growth
SGD closest match:S000000019CCR4Glucose-repressible alcohol dehydrogenase transcriptional effector
CGD closest match:CAL0000194050CCR4Glucose-repressible alcohol dehydrogenase transcriptional effector

Protein alignments

%idAln lengthE-value
MCA_01389_142.466%4385.17e-88MCA_01389_1
CCR4_YARLI27.273%3742.05e-25Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CCR4 PE=3 SV=1
UniRef50_Q6CEJ627.273%3744.74e-22Glucose-repressible alcohol dehydrogenase transcriptional effector n=2 Tax=Yarrowia lipolytica TaxID=4952 RepID=CCR4_YARLI
A0A167E6Z2_9ASCO28.049%3289.38e-24CCR4-NOT core exoribonuclease subunit CCR4 OS=Sugiyamaella lignohabitans GN=CCR4 PE=4 SV=1
A0A0J9XF67_GEOCN27.682%2891.39e-22Similar to Saccharomyces cerevisiae YAL021C CCR4 Component of the CCR4-NOT transcriptional complex, which is involved in regulation of gene expression OS=Geotrichum candidum GN=BN980_GECA12s04036g PE=4 SV=1
A0A1E3PGL9_9ASCO27.273%3197.06e-21Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52099 PE=4 SV=1
A0A060TCH9_BLAAD24.224%3224.31e-17ARAD1D36256p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D36256g PE=4 SV=1
CCR4_CANAL23.397%3121.03e-16Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CCR4 PE=3 SV=2
CCR4_YEAST23.659%3171.01e-13Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCR4 PE=1 SV=2
A0A1E4TJP4_9ASCO27.149%2211.43e-11Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20833 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0409

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 900 1000 1079

Detailed signature matches

    1. SSF56219 (DNase I-like)
    2. PF03372 (Exo_endo_phos)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MIA_00489_1
MKIRNIFKKKQENSGSPVVIIDSSSYQSPSPESSTSPFQDDSDTLASFSARSSGSDSATSSSSTAATVTSVDHQKASLSS
PPHVVSHRPSSSVCYAQVQHHLPATSLPSTLPSASTPSSLPPLQMPPIPPSTHHGTPISTTPSARPLSLQPQQLPRQSSS
SASSSSASSSVSSNSAHSSQFSAPTSFASTNPPSPFKTSQQTNASVITTSGHNDHPLPQSSNPFSNSYEIPLQQPQPTFP
IVPSLLPINIHDPPKQQQQQQPQSQTNSNSKSFLAFPKSQYLRNSRAGRHSLETDRPASATTSNSASANTLNSIPANTTH
SVASVPHRTTSPPNTSSNRTSKYFFKSKKTDVLSSAHYNTSSNQPQQQQNQQHSQATFSSISAHIKKRASTFGPDLISRA
QGVTSGVTRTTASSSSVSAAPAPAAAAGFNTLSSFSATSSTFSPSAGSAGASSLLSTSIDKSDKSDPTSDSWPPLRPWVP
VNETLYNDYAASRLSHHPLTPNGDEEGTIIHKLQGFSVMSYNILSSLYTNRLENTIARKVGTSSSFSSSPSSLASQQAMR
SRRERMALIMKEIKYYTPDILCLQEVDAQEYYGQMHYDLADYDSIYAPKHSHYTSGGNRPHSMLLSSSSSPSHSSGGGPG
LGSTSIQPLVGSAAKNSLPIEGPAIFYKMDRFRLLEKRIFNYADLTLYYKSASAASKPETETLVDEAGLEAFAAERDVRE
RVAGRSNVGIVAVLRHVPSGQIIIVANTQLVPDAKMPPTKLGSTIASTTSNSLADVRMVQAALCLEQIEYFTLKYTSAAP
RSSDDNGNKVPVVLCGDLNSAATSGVYDLLAARGGPVSKLNDWQGRSYARFTDGLHPWHTGERLGLRSSYLVWGEDELVK
KKKKKNPIVVATPPPPSPLLATEIHLMSNNPFSSYVTPSPTPPPVLPLSAPIEVVEKEEEDNSPTTTIHPKRRHILPYTK
MSTAAGEGTLSDYIWYSTSTLAVAEVLGPDPNQRKRLIEEGEDNTDEYVWNDKRVNSTTAGSGSNGNNGNNYTNKTETVK
GKGHETKHIQQERLAQGPTTYPSDHVCLLTRFEFKNQQF

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.