Protein

MCA_mt_19351074

Length
385 amino acids

Description: putative intron-encoded homing endonuclease with LAGLIDADG_1 motif

Browser: mtDNA:36172-37364+

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein function

Annotation:putative intron-encoded homing endonuclease with LAGLIDADG_1 motif
SGD closest match:S000007273BI4Intron-encoded RNA maturase bI4

Protein alignments

%idAln lengthE-value
MIA_mt_1935097156.35%4171e-143MIA_mt_19350971
UniRef50_A0A023UMT356.35%4172e-140Uncharacterized protein (Fragment) n=2 Tax=Magnusiomyces TaxID=1095182 RepID=A0A023UMT3_9ASCO
MBI4_YEAST33.59%1288e-11Intron-encoded RNA maturase bI4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BI4 PE=1 SV=2
Q9B6D2_YARLI28.97%1451e-09ND1-i2 protein, alternatively spliced OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=nd1 PE=4 SV=1

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 385

Detailed signature matches

  1. Domain IPR027434
    Homing endonuclease
    1. G3DSA:3.10.28.10
    2. SSF55608 (Homing en...)
  2. Domain IPR004860
    Homing endonuclease, LAGLIDADG
    1. PF00961 (LAGLIDADG_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TMhelix
  4. TRANSMEMBRANE (Tran...)

Protein sequence

>MCA_mt_19351074
QKEAGQCLMVLLLFIAIDYMTGTMLLYNYLQYKSYNLRNYRNVNGGKNTLLYCQNNNYICYKKQNMQSAENCNMFNNKYY
NNTMMFNKFIKYKGFSETMRQLSNLTILNNKTSMLNDDKFYNWLAGMLDGDGNFDVRKLNNKLVLKAMRMKLHVRDIKML
NIIQNKLHVGRIKLDKNKPYCTYIISTKEDMRIIMNNLNGLMRLKVDNFKKSCDYFNMNFMEADYNIKEYDPYFSGLMDT
DGSMVFNWLNNRMECNLELKYNKYTSKLCLDNVIPNCKPYIMKRTSTLKNYNKINQSMGFKFQNVNHMMHIYNYFMKNRL
YSDFKFYRATKIKQFLDIRHYRYYDFNSLEYKMYSNYLLNWMKHNNSNWTKVKFIKNLNPSSIND

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0004519 endonuclease activity

Cellular Component

None predicted.