Protein

MCA_mt_19351071

Length
332 amino acids

Description: putative intron-encoded homing endonuclease with two LAGLIDADG_1 motifs

Browser: mtDNA:31638-32781+

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein function

Annotation:putative intron-encoded homing endonuclease with two LAGLIDADG_1 motifs
SGD closest match:S000007273BI4Intron-encoded RNA maturase bI4

Protein alignments

%idAln lengthE-value
UniRef50_A0A0E3SX0270.53%3022e-148LAGLIDADG endonuclease n=17 Tax=Dikarya TaxID=451864 RepID=A0A0E3SX02_GIBZA
MIA_mt_1935096943.93%2394e-62MIA_mt_19350969
MBI4_YEAST39.67%3053e-59Intron-encoded RNA maturase bI4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BI4 PE=1 SV=2
Q9B6D2_YARLI41.48%2294e-53ND1-i2 protein, alternatively spliced OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=nd1 PE=4 SV=1

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 332

Detailed signature matches

  1. Domain IPR027434
    Homing endonuclease
    1. G3DSA:3.10.28.10
    2. SSF55608 (Homing en...)
  2. Domain IPR004860
    Homing endonuclease, LAGLIDADG
    1. PF00961 (LAGLIDADG_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TRANSMEMBRANE (Tran...)

Protein sequence

>MCA_mt_19351071
QWWPLNFIFNLNLLQQTMSEEFVLYLLGTINMSYMILYTVMVKITLIYDNSQVTNAHSTQVGTSEAMRLLNKSHHTMDGG
NFIHNKNSTPNIPTKNKADTRFKQWLAGLMDGDGSFLLSKKGYASLEMTMDIRDEYALQSMKNVYGGSIKLRSGVSALRY
RTHHKVGLTTLINDVNGEMRNPNRLMQLNAICVKYDMTLKLPDKLTWNNGWLAGFFDADGTMTINSTNWQLSISAGQKTY
DMLTPLVETYGGYIYVDRGGYGSFKWYVTKKEDMTKLIEYFKKYPSRSAKKNRLHLVPKIYELKTMKAHLVSEDTLLAKS
WKIIMKKWENYE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0004519 endonuclease activity

Cellular Component

None predicted.