MCA_06506_1

Browser: contigD:4439193-4440777+

RNA-seq: read pairs 119, FPKM 2.8, percentile rank 13.4% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0283

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   21 - 527

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 20

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   16 - 20

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   8 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 7

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 20

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   155 - 503

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_06506_1
MQLKFQNILPLFYILQKLLAQESNDSPTNAFSSQSNNSTLSAQPGPSASVALVDACDVDCNAIKNNWVECNKESKISRRS
EIQKFWAIPEFSSENAIIPRADDERNLTCICKKDTSLVDFRIPSCAKCDSSYWYSADFNLQEVINLCGGNIVLDPPPPTE
NTGGGTGNETPGSGNGGNNNDSGSNGNGNANNQESGGVSGSDGINNPGSGNNGGTSNQGSGDNNNSNNGGSGGNGNNNNQ
GSGSTGNSGNTNNEGSGGSNDSGEANNQDSPNNEGTNGSGLDETEDTESGTSGSGANGNTSSQGSEGGNGGANNQDSGNS
DGTNNQGSEGSGNTNNQESEGSSNGDEANNPGSGNNGGTNNPGSGDNNNSNNEGSGGNGSNDNQGSGSSGNNNNQWSVGN
GNTNNQGSGNSGNINNQESGNNNGINNQGSGENQASSDSSIEDGQTGLTGAGAGGSGSSTQNSNSNVNQPNSNIPDNGAT
SGIVTSSGQSLGGSATSSSNDNEENLGNNLKMNILLFMSGFFCALVI

GO term prediction