MCA_06406_1

Browser: contigD:4118308-4118719-

RNA-seq: read pairs 35421, FPKM 3194.6, percentile rank 98.6% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2336
Predicted cleavage: 22

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   16 - 136

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 15

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   11 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   3 - 10

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 15

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. TMhelix
   113 - 135

   TMHMM
   TMhelix (TMhelix)
8. mobidb-lite (disord...)
   33 - 108

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_06406_1
MKAAIVLALASVASASIFQRQVTLTEVVTASPTTVTASGSASGSASGSASESASGSASASGSASASGSASHSGSASHSGS
ASHSGSATGSKTTITATSTKATSTAAASATTSSNGAAAMATGFAVAGGAAIAALIL

GO term prediction