Protein
MCA_06388_1
Length
898 amino acids
Gene name: SEC24
Description: Protein transport protein SEC24
Browser: contigD:4068566-4071263-
RNA-seq: read pairs 8297, FPKM 114.0, percentile rank 80.9% (100% = highest expression)
Protein function
| Annotation: | SEC24 | Protein transport protein SEC24 | |
|---|---|---|---|
| KEGG: | K14007 | SEC24 | protein transport protein SEC24 |
| EGGNOG: | 0PHZQ | SEC24 | Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) |
| SGD closest match: | S000001371 | SEC24 | Protein transport protein SEC24 |
| CGD closest match: | CAL0000196446 | SEC24 | Protein transport protein SEC24 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02929_1 | 62.21% | 950 | 0.0 | MIA_02929_1 |
| A0A167D6P5_9ASCO | 64.95% | 816 | 0.0 | COPII subunit SEC24 OS=Sugiyamaella lignohabitans GN=SEC24 PE=4 SV=1 |
| A0A060T2M8_BLAAD | 63.71% | 813 | 0.0 | ARAD1C33748p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C33748g PE=4 SV=1 |
| A0A1E3PKB4_9ASCO | 59.16% | 901 | 0.0 | Protein transport protein SEC24 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_46409 PE=4 SV=1 |
| A0A0J9XJI6_GEOCN | 57.89% | 900 | 0.0 | Similar to Saccharomyces cerevisiae YIL109C SEC24 Component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat OS=Geotrichum candidum GN=BN980_GECA21s00956g PE=4 SV=1 |
| SEC24_YARLI | 54.00% | 950 | 0.0 | Protein transport protein SEC24 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC24 PE=3 SV=1 |
| UniRef50_A4QUL1 | 56.46% | 774 | 0.0 | Protein transport protein SEC24 n=38 Tax=leotiomyceta TaxID=716546 RepID=SEC24_MAGO7 |
| A0A1E4TGJ2_9ASCO | 47.41% | 831 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31726 PE=4 SV=1 |
| SEC24_CANAL | 49.63% | 804 | 0.0 | Protein transport protein SEC24 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC24 PE=3 SV=2 |
| SEC24_YEAST | 45.41% | 872 | 0.0 | Protein transport protein SEC24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC24 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0140
Protein family membership
None predicted.
Domains and repeats
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Domain
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Domain
1
100
200
300
400
500
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700
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898
Detailed signature matches
no IPR
Unintegrated signatures
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SSF81995 (beta-sand...)
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cd01479 (Sec24-like)
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mobidb-lite (disord...)
Residue annotation
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vWA-beta sandwich ...
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partial metal ion-...
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heterodimer interf...
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VWA-helical domain...
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vWA-Gelsolin like ...
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vWA-rubredoxin lik...
Protein sequence
>MCA_06388_1 MSYQQPEDQHDAGHHSRRRQYPTQQYNFNAQSAAPAYGGAPGYNVGGAPQAPAAAADPYNYQQQGTVFTPAMAQSSPRIS TATPMGGYNPGAPVAPVDPLANQFGNMSIGGAQGYGMPAAPGGGSQKLPLNAIYNTDLLQNMPPPITDLDLPPPPIILPP DASCTGSPEANAPSDVMRCTLNVIPNSHSLLKKSKLPFALVIRPYTSLLYADENVPVIGDPDILRCRRCRCYLNPFVTFL NQGYRWKCSICGLSNDIPARLTFDPNTKSRTDLWNKAQLEYGVVDFIAPSGYMVRAPQPPVYVFILDVSFNSIQNGLLAT AARAIKDNLDRLPNKDDRCKVAFICVDAVINFFKIPSNPEESPSMFVVTDIEDPFLPLPSGILVNLTECRAQIDSLLDNL GQMFARNTTVNNALGSALKSAYELISSIGGKVICLSSSLPNVGIAKLEVREERKNLGTSKENALLQTANSFYKSFSIDCN RSQVSIDMFLFSSHYQDVASLSNLPRFTGGQTYFYPGWNATRPEDVVKFTHEIGEHMSMEIAYEAVLRVRASTELRTSSF YGNFFNRSTDLCAFPAFPRDQSYVVELAIDETISKPWVTFQAALLHSTCHGERRIRVITLSIPTSNTLQDVYASADQLAI TAHLTHKACEKALSSGLKEARDLVNQRLLEMFQTYKKELMTTNVGASAPLQFCTNLRMLPLLASCLTKSIAFRQSAQIAS DLRSASICLLSTLPLKYLIKYLYPDFFSLHDMPEEAGLTDEETGEVILPPKINLSAERIVSHGLYLIHDGQTMFLWVCRE AVPQLILDAFGYESRELVRSGKMELPETDSSLNIRIRAIIAALRNKKDNITWPSFFIVTDEGDPSLRLWASSFLLEDRNS ESVSYSQFLLSLRDKLSS
GO term prediction
Biological Process
GO:0006886 intracellular protein transport
GO:0006888 ER to Golgi vesicle-mediated transport
Molecular Function
GO:0008270 zinc ion binding
Cellular Component
GO:0030127 COPII vesicle coat