Protein

MCA_06381_1

Length
706 amino acids

Description: Protein with F-box domain

Browser: contigD:4032467-4034588+

RNA-seq: read pairs 793, FPKM 13.9, percentile rank 32.3% (100% = highest expression)

Protein function

Annotation:Protein with F-box domain

Protein alignments

%idAln lengthE-value
MIA_04651_131.19%7767e-111MIA_04651_1
A0A0J9XL68_GEOCN25.32%3871e-25Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA26s00571g PE=4 SV=1
UniRef50_A0A0J9XL6825.32%3873e-22Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XL68_GEOCN

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.4054

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 706

Detailed signature matches

  1. Domain IPR001810
    F-box domain
    1. SSF81383 (F-box domain)
    2. PS50181 (FBOX)
    3. PF12937 (F-box-like)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. G3DSA:1.20.12...
  3. NON_CYTOPLASM... (N...)
  4. TRANSMEMBRANE (Tran...)
  5. mobidb-lite (disord...)

Protein sequence

>MCA_06381_1
MSTITSRIPKELILKIFGYVDSDTLYYSVPLVCRFFLLLARDSVLWRKFCFEEIYPEIGFTPSAIKPVENYWEEFQYQKR
LNKLTERLFNKLVTDSHDRGSLVLMIPRLGQRAKFYLNSVYNSPTSTPRQRYYSRELLYAINQRASLIKILSTFYNTEDF
DPFEFLLAFDAFYLDRSCTLGPSTELTYNSEISAVKAELSPLREHLSQTPASRQTRELYCHIAEKIGQILYSWGFINNVS
DKRINPRNVPGFFLSGVFSGERPSCSLVSAAIYNYFSQWVGLPSCLITMDTDVYIRIEDPEYLYRTNNKKQAPSNSNGKN
GHNNGNIESHQHRDNENDQEEMVSDEECFFVDVNRAGKIRNVDEMMVIVQILQNSRIRRPVSLKPSARKDIILAFVRLFA
AHYSLHQDYSKLSSVMFLGVLMFSFLSLVGECYRSLIDSIIPEELSSDRNDIFNIVNPDISNIPKSIFENLDTRFFNMFN
THRISLFNRFENNQSFSEIEEKLNQLYTMAFPPLIYHIPINLSMVYDFLFPYAPKAISIEEKRRAVTKISENISIEMPLV
QPSFKKREKMSQKPKFHLGQVTFSNRTGLYGIIVGWGYISPENGALIEDDINEENPSLAELNTAKVQYIILLESLRISKV
LEPSIVAISKPYECLLDIDYDFFSTESGRFFDDYDDNLCLFIPGNELRDQFPEERDFFVANTKMNI

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.