Protein

MCA_06366_1

Length
343 amino acids

Description: Ribonuclease H2 subunit B

Browser: contigD:3998978-4000010-

RNA-seq: read pairs 85, FPKM 3.1, percentile rank 13.8% (100% = highest expression)

Protein function

Annotation:Ribonuclease H2 subunit B
EGGNOG:0PTIGYdr279p protein family (RNase H2 complex component)

Protein alignments

%idAln lengthE-value
MIA_00831_133.43%3321e-43MIA_00831_1
A0A0J9XGE3_GEOCN29.02%2865e-31Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA16s00461g PE=4 SV=1
UniRef50_A0A0J9XGE329.02%2861e-27Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGE3_GEOCN
A0A060T295_BLAAD25.86%2903e-25ARAD1C27214p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C27214g PE=4 SV=1
Q6C456_YARLI29.82%2751e-21YALI0E29535p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E29535g PE=4 SV=1
A0A161HV90_9ASCO28.23%2942e-20Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_1234 PE=4 SV=1
A0A1E3PDU0_9ASCO24.46%2784e-17Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53246 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0472

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR019024
    Ribonuclease H2, subunit B
    1. PF09468 (RNase_H2-Y...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_06366_1
MTERFKTIILPKISANDKNEFEYSLVSMVHPRSLESSLFLTVHGSSQIFELTSITGTRRLLNKQKSEHADPKSIFIENTT
SQNSTPENETPSYIISDPSLVICTPFSPLYFTLSTLYKHKDTFLFPENLHDFLESETLKIDSTAKSLDYETFRSCIYNVC
EAERPDDKDTKILDSTNRYKLSTQKLFSYLDSIAEKIVKAGLPQDIYQQMVVLPLLSSNIEEKSDEKMVLKATERAAVQL
VCSNLALEVCKDYLSTKDYTDLDELIKKLEIQRKALRAEQERLNQPMGGGAQKRPASSSSKQAANKKKDLKKTPAKSKLS
SSVNSKSITSFFAAKPAKKSKTT

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

GO:0005634 nucleus