Protein

MCA_06362_1

Length
312 amino acids

Gene name: RPP0

Description: 60S acidic ribosomal protein P0

Browser: contigD:3992481-3993420-

RNA-seq: read pairs 72817, FPKM 2874.5, percentile rank 98.3% (100% = highest expression)

Protein function

Annotation:RPP060S acidic ribosomal protein P0
KEGG:K02941RP-LP0 large subunit ribosomal protein LP0
EGGNOG:0PGURRPP060S acidic ribosomal protein P0
SGD closest match:S000004332RPP060S acidic ribosomal protein P0
CGD closest match:CAL0000189629RPP060S acidic ribosomal protein P0

Protein alignments

%idAln lengthE-value
A0A0J9XI47_GEOCN81.09%3122e-15860S acidic ribosomal protein P0 OS=Geotrichum candidum GN=BN980_GECA16s00483g PE=3 SV=1
MIA_00829_181.65%2678e-157MIA_00829_1
A0A060T5H9_BLAAD78.52%2706e-15060S acidic ribosomal protein P0 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B04598g PE=3 SV=1
A0A167FL90_9ASCO78.21%3124e-15060S acidic ribosomal protein P0 OS=Sugiyamaella lignohabitans GN=RPP0 PE=3 SV=1
UniRef50_A0A1B7SC0375.82%2736e-143Uncharacterized protein n=4 Tax=Dikarya TaxID=451864 RepID=A0A1B7SC03_9ASCO
A0A1D8PQS0_CANAL76.28%3127e-14760S acidic ribosomal protein P0 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPP0 PE=3 SV=1
A0A1E3PRK0_9ASCO75.08%3138e-14460S acidic ribosomal protein P0 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_21766 PE=3 SV=1
A0A1E4TEH8_9ASCO71.57%3136e-13960S acidic ribosomal protein P0 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_101721 PE=3 SV=1
RLA0_YEAST68.91%3121e-13060S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPP0 PE=1 SV=2
Q6CEP2_YARLI72.29%3143e-13060S acidic ribosomal protein P0 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B14146g PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0197

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR001790
    Ribosomal protein L10P
    1. PF00466 (Ribosomal_L10)
  2. Family IPR030670
    60S acidic ribosomal protein P0
    1. PIRSF039087 (L10E)
Unintegrated signatures no IPR
Unintegrated signatures
  1. PF00428 (Ribosomal_60s)
  2. SSF160369 (Ribosoma...)
  3. cd05795 (Ribosomal_...)
  4. mobidb-lite (disord...)

Residue annotation

  1. 23S rRNA interface...
  2. putative Interface...

Protein sequence

>MCA_06362_1
MGGASEKKTEYFAKLRELIDEYKSIFLVGVDNVSSQQMHEIRKALRGKAVLLMGKNTMWRRAFRDFVEEVPALENILPLL
KGNVGFVFTNDDLKTIRDIVIENRVAAPARAGAIAPKDVFVPGGNTGMEPGKTSFFQALGIPTKITRGTIEITNDVQVLT
AGSKVGPSEATLLNMLNISPFTYGMTVEHVYDNGQVFSPSILDITDDELVGHFLSAVKTIASISLAANYPTLPAVSHSII
NHYKELLALSIATEYTFEGSESIKDRLANPDAYAAAAPAAAAGGASESAAAEEAPAEEEEESDDDMGFGLFD

GO term prediction

Biological Process

GO:0042254 ribosome biogenesis

Molecular Function

None predicted.

Cellular Component

GO:0005622 intracellular