Protein
MCA_06356_1
Length
1,626 amino acids
Gene name: NUP188
Description: Nucleoporin NUP188
Browser: contigD:3972973-3977926-
RNA-seq: read pairs 2534, FPKM 19.2, percentile rank 40.4% (100% = highest expression)
Protein function
| Annotation: | NUP188 | Nucleoporin NUP188 | |
|---|---|---|---|
| KEGG: | K14311 | NUP188 | nuclear pore complex protein Nup188 |
| EGGNOG: | 0PIUM | FG05542.1 | nucleoporin |
| SGD closest match: | S000004571 | NUP188 | Nucleoporin NUP188 |
| CGD closest match: | CAL0000201257 | NUP188 | Nup188p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06279_1 | 54.57% | 1631 | 0.0 | MIA_06279_1 |
| A0A0J9X3Q5_GEOCN | 44.62% | 1616 | 0.0 | Similar to Saccharomyces cerevisiae YML103C NUP188 Subunit of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA01s11593g PE=4 SV=1 |
| UniRef50_A0A0J9X3Q5 | 44.62% | 1616 | 0.0 | Similar to Saccharomyces cerevisiae YML103C NUP188 Subunit of the nuclear pore complex (NPC) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3Q5_GEOCN |
| A0A060T119_BLAAD | 32.41% | 1657 | 0.0 | ARAD1C20548p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C20548g PE=4 SV=1 |
| A0A167ELR4_9ASCO | 34.28% | 1409 | 0.0 | Nup188p OS=Sugiyamaella lignohabitans GN=NUP188 PE=4 SV=1 |
| Q6C1T5_YARLI | 27.32% | 1398 | 3e-115 | YALI0F13519p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F13519g PE=4 SV=1 |
| A0A1E4TIK1_9ASCO | 26.79% | 1366 | 1e-115 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_42155 PE=4 SV=1 |
| A0A1D8PEL3_CANAL | 24.69% | 1709 | 2e-111 | Nup188p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NUP188 PE=4 SV=1 |
| A0A1E3PN16_9ASCO | 30.03% | 889 | 2e-101 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82525 PE=4 SV=1 |
| NU188_YEAST | 24.33% | 1344 | 6e-72 | Nucleoporin NUP188 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP188 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0232
Protein family membership
- Nucleoporin Nup188 (IPR018864)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF10487 (Nup188)
-
Protein sequence
>MCA_06356_1 MSTNSTSEVSPSYWTHETAHQVLKNGGSSYLATEFKRYLDQYLPRLRKCYEPIVSKDNASTISIDKMFPTGKNWSKEKIE EDRTNLVKLLNIDKDEALRIVLHGHLRGVLTKEKRLLHHARLYLQEQRAVLKIVTLLFSYRREPPAHLSPEYLEIANNYS AEVMADPDLFSGIVKAIESNFKNPFFLESDDDNLSALFVKECLLFQIDLLNLLLVGVLTVLPSDSLLIDSWVNSIEATNH FTYPSYPILENETGLIKIINSLTTTITLAFFDFDQDFSIEGASPNSYINNPDILLKLHKNFNTLLSSQPSASPIVLGWSF ILNIIAARLGEVPNSKFDKFFAEVIPDNIPKVTRDSQRIPDYEILMLLASDMAQSALRIDPFEILQDIYEIFPELPIYSS TFVSYLKASLPYVSLTETLATFVSSVCKFPEQAEKVFVDTFGDRLFTLATLRFPTAMHPFLKFSQSLGENAYDAVSQLYT FMQPFPKDFQDYKVIGGSASVVELTREISLLPSIEKVKQVDFGPIVLPPGTRGEIHVINHARYIIWKFNYNGWSFLGSLL ERNYIISNYNIGETPSYDENTSSIIDLLTNTISSIEDDQKAFHLLTMTSECLRDSDIIDLIFKILEDAIFAKNISLSTSC VKFVSTICLLLPDRVWSYLGRSSMLERNGIPSSIATILGLTEHVSGKYDLTIAILNMIKTLLPVSLQSLLISQVSSKIRS EVIAQLVRHTLTIFESFAYRSYIDSRQKVEIALQCVNIFNTVLSYSFDIDETSTLDKKITSILAPATEYLVQQLLTPEQV IPRALKPLVGSLEHSAMSVTSLDTDYPLEPMESLWLYSSLNFASTLVKARTLLNMAPSQLEKTLFSFSLHLSILYSRYPQ LRPVIMEIFISIIKAPWPSSEQPSLLAHLGKYAHMFISNLTGSLENRLENEYTVMKVASCFSTIIEGQQEGLSILLLTGR DTRKASQVEQQVTSLLQVTENRVSSSNTIPSEILLPLLRSMASAYSNWKLGTFSSNPELAASLLKIVDNCFQLCNSTEQN ESDPLEYANSLAIAAQALLIFSVQVYKSPDGPGIQKFIQYLQEKNNMINISKKFLEISKLNSKQHEDLFENFDFRWPQCG GLRKFAKSNFEVLDFGPSYIFDIQLLDLILGTQESWIGFRNEVIAENITFSKLHAQLQLVNAWCSFNTSLAICYSNKLKK INTEVNQYSKVLKMLDKVADICLEKVSEEEYSVPVLSAPIQSRIALMFTIKLQISRRKLSNDTFSTLSSIYNILSSPDYK FIEAISNDGKQESSDKSYRLLLRALIISLDGLKSVSENSFQILQIIYGIFCNIIIRGMSAAVQAALSNPDCGADVDMVLI ISILRKCLAVDGVKSLYPKVASVLFETQCTKLVMGLYSYAQSLSTGNDDLAYGELALFYLLEWLNVSQIADQLINNGILD SLMESPTSLKIREGGVTPTTNPQLHTLWIKGILPILLVLLQNVGSRIVGDILIIINFFSEQIQSSFDSWSNPTEISTSTI TETTQLLLLVDILGKFSSNPDAIKNNLKGTIPLSEDLIGSIDYLLSHPRFLNASLVATSPEEQRLFLIEDSSSTPDGNKL LTLVQDELRDLRDLLNKIDIRGDESD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0017056 structural constituent of nuclear pore
Cellular Component
None predicted.